RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TCP10L2B9ZVM9 353 aa14.64□□□□□ -0.07
VIPAS39-206ENST00000553888 PPP6R2O75170 966 aa14.64□□□□□ -0.07
VIPAS39-206ENST00000553888 ZNF202O95125 648 aa14.64□□□□□ -0.07
VIPAS39-206ENST00000553888 ZNF174Q15697 407 aa14.64□□□□□ -0.07
VIPAS39-206ENST00000553888 RILPL1Q5EBL4 403 aa14.64□□□□□ -0.07
VIPAS39-206ENST00000553888 RSBN1LQ6PCB5 846 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-206ENST00000553888 ANP32BQ92688 251 aaKnown RBP14.64□□□□□ -0.07
VIPAS39-206ENST00000553888 GDF11O95390 407 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 PDHBP11177 359 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 CMA1P23946 247 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 C11orf57Q6ZUT1 292 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 USP49Q70CQ1 688 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 GPCPD1Q9NPB8 672 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 PIM2Q9P1W9 311 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 PLIN4Q96Q06 1357 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 RAD21O60216 631 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 NOVP48745 357 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 JAG1P78504 1218 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 SASS6Q6UVJ0 657 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 CDAN1Q8IWY9 1227 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 SDF4Q9BRK5 362 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 IDI2Q9BXS1 227 aa14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 FBXO2Q9UK22 296 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-206ENST00000553888 FER1L6Q2WGJ9 1857 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 HDLBPQ00341 1268 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 PIGSQ96S52 555 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 MRIQ9BWK5 157 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 RRP1BQ14684 758 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 TTBK2Q6IQ55 1244 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 KRI1Q8N9T8 703 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 PRDM10Q9NQV6 1147 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 SWAP70Q9UH65 585 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 STXBP3O00186 592 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 BIN1O00499 593 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 RESP18Q5W5W9 173 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 ISM2Q6H9L7 571 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 GMLQ99445 158 aa14.62□□□□□ -0.07
VIPAS39-206ENST00000553888 TTLL1O95922 423 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 VIL1P09327 827 aaKnown RBP14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 SLC16A2P36021 539 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 PDLIM2Q96JY6 352 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 MTFR1LQ9H019 292 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 BRMS1Q9HCU9 246 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 BCCIPQ9P287 314 aaKnown RBP eCLIP14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 HPSEQ9Y251 543 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 TRIM75PA6NK02 468 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 FOXN1O15353 648 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 CUTAO60888 179 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 POLD1P28340 1107 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 SYKP43405 635 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 NT5C2P49902 561 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 GNAQP50148 359 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 JMYQ8N9B5 988 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 PI4KBQ9UBF8 816 aa14.61□□□□□ -0.07
VIPAS39-206ENST00000553888 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 CXCL9Q07325 125 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 SEPT2Q15019 361 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 CERKLQ49MI3 558 aaPredicted RBP14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 DALRD3Q5D0E6 543 aaKnown RBP14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 NIM1KQ8IY84 436 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 BLIDQ8IZY5 108 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 CSRNP2Q9H175 543 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 PTPREP23469 700 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 LONRF3Q496Y0 759 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 TTC38Q5R3I4 469 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 PDILTQ8N807 584 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 FAM200AQ8TCP9 573 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 EHD4Q9H223 541 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 RRAGDQ9NQL2 400 aaPredicted RBP14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 BARHL2Q9NY43 387 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 BCS1LQ9Y276 419 aa14.6□□□□□ -0.07
VIPAS39-206ENST00000553888 NFKBIEO00221 500 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 MCM7P33993 719 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 CSRNP1Q96S65 589 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 SPZ1Q9BXG8 430 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 VEZTQ9HBM0 779 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 ZNRF3Q9ULT6 936 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 PCDHA4Q9UN74 947 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 ADCY5O95622 1261 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 EEF2P13639 858 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 TGFB2P61812 414 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 RASSF7Q02833 373 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 PNOCQ13519 176 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 COA7Q96BR5 231 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 TRIM44Q96DX7 344 aaPredicted RBP14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 TRIM34Q9BYJ4 488 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 DHX36Q9H2U1 1008 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 KCNH3Q9ULD8 1083 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 PCDHA6Q9UN73 950 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 PCDHA8Q9Y5H6 950 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 ZNF165P49910 485 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 NAPAP54920 295 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 DLGAP5Q15398 846 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 SIAH1Q8IUQ4 282 aa14.59□□□□□ -0.07
VIPAS39-206ENST00000553888 GRAMD1CQ8IYS0 662 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms