RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 ATG4CQ96DT6 458 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 NR2E3Q9Y5X4 410 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 ZNF236Q9UL36 1845 aa21.07■□□□□ 0.96
FOXN3-204ENST00000553840 SLC25A27O95847 323 aa21.07■□□□□ 0.96
FOXN3-204ENST00000553840 HOXC6P09630 235 aa21.07■□□□□ 0.96
FOXN3-204ENST00000553840 ERCC3P19447 782 aa21.07■□□□□ 0.96
FOXN3-204ENST00000553840 FAM83BQ5T0W9 1011 aa21.07■□□□□ 0.96
FOXN3-204ENST00000553840 NCAPG2Q86XI2 1143 aa21.07■□□□□ 0.96
FOXN3-204ENST00000553840 CLIP2Q9UDT6 1046 aa21.07■□□□□ 0.96
FOXN3-204ENST00000553840 F5H6K3 240 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 TTLL1O95922 423 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 KLRC3Q07444 240 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 PPP4R3BQ5MIZ7 849 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 CHD1LQ86WJ1 897 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 PAWRQ96IZ0 340 aaKnown RBP21.06■□□□□ 0.96
FOXN3-204ENST00000553840 PPP1R9AQ9ULJ8 1098 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 SYNPO2Q9UMS6 1093 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 ADAMTS5Q9UNA0 930 aa21.06■□□□□ 0.96
FOXN3-204ENST00000553840 ZNFX1Q9P2E3 1918 aaKnown RBP21.06■□□□□ 0.96
FOXN3-204ENST00000553840 ADORA2AP29274 412 aa21.05■□□□□ 0.96
FOXN3-204ENST00000553840 CCDC129Q6ZRS4 1044 aa21.05■□□□□ 0.96
FOXN3-204ENST00000553840 NEDD1Q8NHV4 660 aa21.05■□□□□ 0.96
FOXN3-204ENST00000553840 MKL1Q969V6 931 aa21.05■□□□□ 0.96
FOXN3-204ENST00000553840 NBPF3Q9H094 633 aa21.05■□□□□ 0.96
FOXN3-204ENST00000553840 MTMR4Q9NYA4 1195 aa21.05■□□□□ 0.96
FOXN3-204ENST00000553840 OGDHLQ9ULD0 1010 aa21.05■□□□□ 0.96
FOXN3-204ENST00000553840 IGKV6D-41A0A0C4DH26 115 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 H0YGN5 161 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 VWA5AO00534 786 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 FCER1AP12319 257 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 COPB2P35606 906 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 TFAP4Q01664 338 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 TMEM132BQ14DG7 1078 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 MCMDC2Q4G0Z9 681 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 ABRAQ8N0Z2 381 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 RILPL2Q969X0 211 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 CEP95Q96GE4 821 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 SLF1Q9BQI6 1058 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 FBXO28Q9NVF7 368 aa21.04■□□□□ 0.96
FOXN3-204ENST00000553840 CTDP1Q9Y5B0 961 aaPredicted RBP21.04■□□□□ 0.96
FOXN3-204ENST00000553840 SUPT16HQ9Y5B9 1047 aaKnown RBP21.04■□□□□ 0.96
FOXN3-204ENST00000553840 PLIN4Q96Q06 1357 aa21.03■□□□□ 0.96
FOXN3-204ENST00000553840 EVI5O60447 810 aa21.03■□□□□ 0.96
FOXN3-204ENST00000553840 IGHDP01880 384 aa21.03■□□□□ 0.96
FOXN3-204ENST00000553840 CCND3P30281 292 aaPredicted RBP21.03■□□□□ 0.96
FOXN3-204ENST00000553840 STAT3P40763 770 aa21.03■□□□□ 0.96
FOXN3-204ENST00000553840 NUCB1Q02818 461 aa21.03■□□□□ 0.96
FOXN3-204ENST00000553840 RIOX2Q8IUF8 465 aa21.03■□□□□ 0.96
FOXN3-204ENST00000553840 PRPF38AQ8NAV1 312 aaKnown RBP21.03■□□□□ 0.96
FOXN3-204ENST00000553840 NPLOC4Q8TAT6 608 aa21.03■□□□□ 0.96
FOXN3-204ENST00000553840 MSCO60682 206 aa21.02■□□□□ 0.96
FOXN3-204ENST00000553840 SLC34A2O95436 690 aa21.02■□□□□ 0.96
FOXN3-204ENST00000553840 NDUFB10O96000 172 aa21.02■□□□□ 0.96
FOXN3-204ENST00000553840 CNGA1P29973 690 aa21.02■□□□□ 0.96
FOXN3-204ENST00000553840 OLFML2BQ68BL8 750 aa21.02■□□□□ 0.96
FOXN3-204ENST00000553840 NUP88Q99567 741 aaPredicted RBP21.02■□□□□ 0.96
FOXN3-204ENST00000553840 FLRT1Q9NZU1 646 aa21.02■□□□□ 0.96
FOXN3-204ENST00000553840 TSPY2A6NKD2 308 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 MFAP1P55081 439 aaKnown RBP21.01■□□□□ 0.95
FOXN3-204ENST00000553840 CTDSPL2Q05D32 466 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 KCTD2Q14681 263 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 ALX1Q15699 326 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 FAM47AQ5JRC9 791 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 GMCL1P1Q8NEA9 526 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 DIS3LQ8TF46 1054 aaKnown RBP21.01■□□□□ 0.95
FOXN3-204ENST00000553840 OSBPL3Q9H4L5 887 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 C11orf49Q9H6J7 331 aa21.01■□□□□ 0.95
FOXN3-204ENST00000553840 FRMPD3Q5JV73 1810 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 A0A0D9SFI3 127 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 ZBED4O75132 1171 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 CYP2C19P33261 490 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 HABP4Q5JVS0 413 aaKnown RBP21■□□□□ 0.95
FOXN3-204ENST00000553840 VPS53Q5VIR6 699 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 PLEKHM2Q8IWE5 1019 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 FAM227BQ96M60 508 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 MMP19Q99542 508 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 ANAPC4Q9UJX5 808 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 FEM1BQ9UK73 627 aa21■□□□□ 0.95
FOXN3-204ENST00000553840 PLXNA1Q9UIW2 1896 aa20.99■□□□□ 0.95
FOXN3-204ENST00000553840 FOXP2O15409 715 aa20.99■□□□□ 0.95
FOXN3-204ENST00000553840 RANBP6O60518 1105 aaKnown RBP20.99■□□□□ 0.95
FOXN3-204ENST00000553840 NMIQ13287 307 aaPredicted RBP20.99■□□□□ 0.95
FOXN3-204ENST00000553840 SLFN13Q68D06 897 aa20.99■□□□□ 0.95
FOXN3-204ENST00000553840 LRRC47Q8N1G4 583 aaKnown RBP20.99■□□□□ 0.95
FOXN3-204ENST00000553840 TEX13BQ9BXU2 312 aa20.99■□□□□ 0.95
FOXN3-204ENST00000553840 ZNF214Q9UL59 606 aaPredicted RBP20.99■□□□□ 0.95
FOXN3-204ENST00000553840 ISY1Q9ULR0 285 aaKnown RBP20.99■□□□□ 0.95
FOXN3-204ENST00000553840 STX8Q9UNK0 236 aa20.99■□□□□ 0.95
FOXN3-204ENST00000553840 COBLO75128 1261 aa20.98■□□□□ 0.95
FOXN3-204ENST00000553840 BMP3P12645 472 aa20.98■□□□□ 0.95
FOXN3-204ENST00000553840 LHX8Q68G74 356 aa20.98■□□□□ 0.95
FOXN3-204ENST00000553840 KIFC2Q96AC6 838 aa20.98■□□□□ 0.95
FOXN3-204ENST00000553840 TOMM22Q9NS69 142 aa20.98■□□□□ 0.95
FOXN3-204ENST00000553840 DDX20Q9UHI6 824 aaKnown RBP20.98■□□□□ 0.95
FOXN3-204ENST00000553840 COLQQ9Y215 455 aaPredicted RBP20.98■□□□□ 0.95
FOXN3-204ENST00000553840 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.98■□□□□ 0.95
FOXN3-204ENST00000553840 CCDC171Q6TFL3 1326 aa20.98■□□□□ 0.95
FOXN3-204ENST00000553840 HIP1O00291 1037 aa20.97■□□□□ 0.95
FOXN3-204ENST00000553840 FGAP02671 866 aa20.97■□□□□ 0.95
FOXN3-204ENST00000553840 FDX1P10109 184 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms