RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 FBXO28Q9NVF7 368 aa17.4■□□□□ 0.38
MTHFD1-204ENST00000553405 RNF186Q9NXI6 227 aa17.4■□□□□ 0.38
MTHFD1-204ENST00000553405 ADAMTS5Q9UNA0 930 aa17.4■□□□□ 0.38
MTHFD1-204ENST00000553405 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 PLA2G6O60733 806 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 CYP2C8P10632 490 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 LBX2Q6XYB7 198 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 ZNF654Q8IZM8 581 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 P2RX7Q99572 595 aaKnown RBP17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 NID2Q14112 1375 aa17.39■□□□□ 0.37
MTHFD1-204ENST00000553405 ERICH2A1L162 156 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 PALM3A6NDB9 673 aaPredicted RBP17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 SPDYE16A6NNV3 312 aaPredicted RBP17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 CA12O43570 354 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 BMP3P12645 472 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 CRHR2Q13324 411 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 GRM4Q14833 912 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 APOA5Q6Q788 366 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 TMTC2Q8N394 836 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 BRF1Q92994 677 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 MAP3K14Q99558 947 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 MYL10Q9BUA6 226 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 SAGE1Q9NXZ1 904 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 MAD2L2Q9UI95 211 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
MTHFD1-204ENST00000553405 DDAH1O94760 285 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 SLC1A4P43007 532 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 MAP2K1Q02750 393 aaPredicted RBP17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 TTBK2Q6IQ55 1244 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 KCTD1Q719H9 257 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 STAG2Q8N3U4 1231 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 REPS2Q8NFH8 660 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 UPF2Q9HAU5 1272 aaKnown RBP17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 FAM217BQ9NTX9 383 aaPredicted RBP17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
MTHFD1-204ENST00000553405 CNMDO75829 334 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 BCRP11274 1271 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 DSG3P32926 999 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 RCAN1P53805 252 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 HERVK_113P62684 666 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 APOBRQ0VD83 1088 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 PABPC4Q13310 644 aaKnown RBP eCLIP17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 TAF1CQ15572 869 aaPredicted RBP17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 OTUD7BQ6GQQ9 843 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 CHMP4CQ96CF2 233 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 PARK7Q99497 189 aaKnown RBP17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 TXNRD2Q9NNW7 524 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 PPP1R9AQ9ULJ8 1098 aa17.36■□□□□ 0.37
MTHFD1-204ENST00000553405 TMEM232C9JQI7 657 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 RAD21O60216 631 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 TLR2O60603 784 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 PEX10O60683 326 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 TRPA1O75762 1119 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 GOLGA8HP0CJ92 632 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 NEK4P51957 841 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 AK2P54819 239 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 COG2Q14746 738 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 ASPRV1Q53RT3 343 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 C17orf99Q6UX52 265 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 CATIPQ7Z7H3 387 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 ATG4CQ96DT6 458 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 SLF1Q9BQI6 1058 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 RBPJLQ9UBG7 517 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 FEM1BQ9UK73 627 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 PNMA3Q9UL41 463 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 MTMR7Q9Y216 660 aa17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 FRMPD2Q68DX3 1309 aaPredicted RBP17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 COL11A1P12107 1806 aaPredicted RBP17.35■□□□□ 0.37
MTHFD1-204ENST00000553405 KLF18A0A0U1RQI7 1052 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 CCDC69A6NI79 296 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 FLOT1O75955 427 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 RXRAP19793 462 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 OSBPP22059 807 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 STAT2P52630 851 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 IRX3P78415 501 aaPredicted RBP17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 FUT2Q10981 343 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 RABEP1Q15276 862 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 NBPF11Q86T75 865 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 RAB11FIP4Q86YS3 637 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 MORF4L1Q9UBU8 362 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 SLC12A7Q9Y666 1083 aa17.34■□□□□ 0.37
MTHFD1-204ENST00000553405 VWA5AO00534 786 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 CYTH3O43739 400 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms