RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 GMCL1Q96IK5 515 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 EFCC1Q9HA90 598 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 TRIM17Q9Y577 477 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 E7EWF7 191 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 REC8O95072 547 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 TOP1P11387 765 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 ERVK-24P63145 666 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 RCSD1Q6JBY9 416 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 RALYLQ86SE5 291 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 GPRC5AQ8NFJ5 357 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 TTC14Q96N46 770 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 MCOLN1Q9GZU1 580 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 TXNRD2Q9NNW7 524 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 TAF6LQ9Y6J9 622 aa13.79□□□□□ -0.2
TRAFD1-209ENST00000552896 SLC27A2O14975 620 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 CNMDO75829 334 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 CTGFP29279 349 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 PSMC4P43686 418 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 PRMT2P55345 433 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 NECTIN1Q15223 517 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 SLFN13Q68D06 897 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 FBXO46Q6PJ61 603 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 POTEEQ6S8J3 1075 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 STOX1Q6ZVD7 989 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 DGKHQ86XP1 1220 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 ENAHQ8N8S7 591 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 NCOA7Q8NI08 942 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 DCAF4Q8WV16 495 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 ZSCAN10Q96SZ4 725 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 SLF1Q9BQI6 1058 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 TMEM47Q9BQJ4 181 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 PAGR1Q9BTK6 254 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 ZSWIM5Q9P217 1185 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 RBPJLQ9UBG7 517 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 PPP1R9AQ9ULJ8 1098 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 TNKSO95271 1327 aa13.78□□□□□ -0.2
TRAFD1-209ENST00000552896 SMCHD1A6NHR9 2005 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 EPB41L2O43491 1005 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 BMP3P12645 472 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 SLC1A4P43007 532 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 CCNA1P78396 465 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 MB21D2Q8IYB1 491 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 ATG4CQ96DT6 458 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 FBXO28Q9NVF7 368 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 FEM1BQ9UK73 627 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
TRAFD1-209ENST00000552896 TNPO2O14787 897 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 HOXD10P28358 340 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 MAPK4P31152 587 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 STAT2P52630 851 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 CYB5R4Q7L1T6 521 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 SRRDQ9UH36 339 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 PTPN22Q9Y2R2 807 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 LCTP09848 1927 aa13.76□□□□□ -0.21
TRAFD1-209ENST00000552896 VWA5AO00534 786 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 PEX10O60683 326 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 PLA2G6O60733 806 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 SNHG28P0DPA3 235 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 PDHBP11177 359 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 MCCP23508 829 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 SEC23AQ15436 765 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 RASGRP2Q7LDG7 609 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 FAM160B2Q86V87 743 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 PRPF38AQ8NAV1 312 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 SHCBP1Q8NEM2 672 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 COA7Q96BR5 231 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 MTA3Q9BTC8 594 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 KAT14Q9H8E8 782 aa13.75□□□□□ -0.21
TRAFD1-209ENST00000552896 TMEM232C9JQI7 657 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 FDX1P10109 184 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 ZKSCAN1P17029 563 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 ANTXR2P58335 489 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 PRKCZQ05513 592 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 KRT32Q14532 448 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 CCDC96Q2M329 555 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 TSGA10IPQ3SY00 556 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 IFIT1BQ5T764 474 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 REPS2Q8NFH8 660 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 CHURC1Q8WUH1 139 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 SOCS4Q8WXH5 440 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 SPATC1LQ9H0A9 340 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 PORCNQ9H237 461 aa13.74□□□□□ -0.21
TRAFD1-209ENST00000552896 ZNF214Q9UL59 606 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms