RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, humanhuman

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-223ENST00000552352 DNAJC21Q5F1R6 531 aaKnown RBP9.04□□□□□ -0.96
RPH3A-223ENST00000552352 SGMS1Q86VZ5 419 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 FAM107BQ9H098 131 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 SEC31BQ9NQW1 1179 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 FAM217BQ9NTX9 383 aaPredicted RBP9.04□□□□□ -0.96
RPH3A-223ENST00000552352 SRPRBQ9Y5M8 271 aaKnown RBP9.04□□□□□ -0.96
RPH3A-223ENST00000552352 RPS6KA4O75676 772 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 ERVK-24P63145 666 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 CYP26C1Q6V0L0 522 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 NFXL1Q6ZNB6 911 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 SUGP1Q8IWZ8 645 aaKnown RBP9.04□□□□□ -0.96
RPH3A-223ENST00000552352 DIS3L2Q8IYB7 885 aaKnown RBP9.04□□□□□ -0.96
RPH3A-223ENST00000552352 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
RPH3A-223ENST00000552352 SLC26A6Q9BXS9 759 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 NYXQ9GZU5 481 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 FOXP1Q9H334 677 aaPredicted RBP9.04□□□□□ -0.96
RPH3A-223ENST00000552352 LY9Q9HBG7 655 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 ABHD10Q9NUJ1 306 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 DENND2AQ9ULE3 1009 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 CEP131Q9UPN4 1083 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 NID2Q14112 1375 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 CASZ1Q86V15 1759 aa9.04□□□□□ -0.96
RPH3A-223ENST00000552352 BTBD18B2RXH4 712 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 ONECUT3O60422 494 aaPredicted RBP9.03□□□□□ -0.96
RPH3A-223ENST00000552352 PDE6AP16499 860 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 PHKA1P46020 1223 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 USP14P54578 494 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 TRIM14Q14142 442 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
RPH3A-223ENST00000552352 TADA2BQ86TJ2 420 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 SPATA5Q8NB90 893 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 NKX2-3Q8TAU0 364 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 IGDCC4Q8TDY8 1250 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 ZBTB9Q96C00 473 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 MTA3Q9BTC8 594 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 SENP2Q9HC62 589 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 PIH1D3Q9NQM4 214 aaKnown RBP9.03□□□□□ -0.96
RPH3A-223ENST00000552352 NARFQ9UHQ1 456 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 HPCAL4Q9UM19 191 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 PNPLA7Q6ZV29 1317 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 TAF1LQ8IZX4 1826 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 A0A087WUV0 522 aaPredicted RBP9.03□□□□□ -0.96
RPH3A-223ENST00000552352 TARSL2A2RTX5 802 aaKnown RBP9.03□□□□□ -0.96
RPH3A-223ENST00000552352 KCNQ2O43526 872 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 SHOX2O60902 331 aaPredicted RBP9.03□□□□□ -0.96
RPH3A-223ENST00000552352 ABL1P00519 1130 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 CD44P16070 742 aaKnown RBP9.03□□□□□ -0.96
RPH3A-223ENST00000552352 IFNAR1P17181 557 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 LIFRP42702 1097 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 UBE4AQ14139 1066 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 NCAPH2Q6IBW4 605 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 TRAPPC11Q7Z392 1133 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 NGLY1Q96IV0 654 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 DEF6Q9H4E7 631 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 PCDHB6Q9Y5E3 794 aa9.03□□□□□ -0.96
RPH3A-223ENST00000552352 B4E1Z4 1266 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 UBE2Q2LH0YL09 131 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 PSMD14O00487 310 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 GNAT2P19087 354 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 STX17P56962 302 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 AKAP17AQ02040 695 aaKnown RBP9.02□□□□□ -0.96
RPH3A-223ENST00000552352 TMEM67Q5HYA8 995 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 KLHL10Q6JEL2 608 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 COG1Q8WTW3 980 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 GSDMAQ96QA5 445 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 CSRNP2Q9H175 543 aa9.02□□□□□ -0.96
RPH3A-223ENST00000552352 BSDC1Q9NW68 430 aaPredicted RBP9.02□□□□□ -0.96
RPH3A-223ENST00000552352 ZC3H4Q9UPT8 1303 aaKnown RBP9.02□□□□□ -0.96
RPH3A-223ENST00000552352 SBF2Q86WG5 1849 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 MAP3K12Q12852 859 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 STIM1Q13586 685 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 MMS22LQ6ZRQ5 1243 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 RPGRIP1Q96KN7 1286 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 C8orf37Q96NL8 207 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 NCAPGQ9BPX3 1015 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 MYL10Q9BUA6 226 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 PLEKHA4Q9H4M7 779 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 AATFQ9NY61 560 aaKnown RBP eCLIP9.02□□□□□ -0.97
RPH3A-223ENST00000552352 LIMA1Q9UHB6 759 aaKnown RBP9.02□□□□□ -0.97
RPH3A-223ENST00000552352 SLC12A7Q9Y666 1083 aa9.02□□□□□ -0.97
RPH3A-223ENST00000552352 LRRC10BA6NIK2 292 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 PPP1R3GB7ZBB8 358 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 ANKRD65E5RJM6 399 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 MYH8P13535 1937 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 GUCY1A2P33402 732 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 DPYDQ12882 1025 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 RASGRF1Q13972 1273 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 USP49Q70CQ1 688 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 TRIM22Q8IYM9 498 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 STRBPQ96SI9 672 aaKnown RBP9.01□□□□□ -0.97
RPH3A-223ENST00000552352 ZNF532Q9HCE3 1301 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 KCNJ14Q9UNX9 436 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 CCT6AP40227 531 aaKnown RBP9.01□□□□□ -0.97
RPH3A-223ENST00000552352 CHRNDQ07001 517 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 SPAG1Q07617 926 aa9.01□□□□□ -0.97
RPH3A-223ENST00000552352 KRT31Q15323 416 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms