RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 PANK1Q8TE04 598 aa26.16■■□□□ 1.78
SMARCD1-212ENST00000551966 FBXO28Q9NVF7 368 aa26.16■■□□□ 1.78
SMARCD1-212ENST00000551966 SLC25A27O95847 323 aa26.15■■□□□ 1.78
SMARCD1-212ENST00000551966 CDK8P49336 464 aa26.15■■□□□ 1.78
SMARCD1-212ENST00000551966 EPHB4P54760 987 aa26.15■■□□□ 1.78
SMARCD1-212ENST00000551966 HSP90AB4PQ58FF6 505 aa26.15■■□□□ 1.78
SMARCD1-212ENST00000551966 MYLIPQ8WY64 445 aa26.15■■□□□ 1.78
SMARCD1-212ENST00000551966 XPNPEP3Q9NQH7 507 aa26.15■■□□□ 1.78
SMARCD1-212ENST00000551966 APBB1O00213 710 aa26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 WDR46O15213 610 aaKnown RBP26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 CHGBP05060 677 aa26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 ZNF792Q3KQV3 632 aa26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 C12orf60Q5U649 245 aa26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 CLASRPQ8N2M8 674 aaKnown RBP26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 MAFAQ8NHW3 353 aaPredicted RBP26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 ATP8A2Q9NTI2 1148 aa26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 NRBP1Q9UHY1 535 aa26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 TACC3Q9Y6A5 838 aa26.14■■□□□ 1.78
SMARCD1-212ENST00000551966 PARP14Q460N5 1801 aa26.14■■□□□ 1.77
SMARCD1-212ENST00000551966 MBD4O95243 580 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 PGK1P00558 417 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 EEF2P13639 858 aaKnown RBP26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 ADD2P35612 726 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 RIOX2Q8IUF8 465 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 CCDC17Q96LX7 622 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 MMP19Q99542 508 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 TINF2Q9BSI4 451 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 SH2D4AQ9H788 454 aa26.13■■□□□ 1.77
SMARCD1-212ENST00000551966 USP17L12C9JPN9 530 aa26.12■■□□□ 1.77
SMARCD1-212ENST00000551966 USP17L21D6R901 530 aa26.12■■□□□ 1.77
SMARCD1-212ENST00000551966 ZNF865P0CJ78 1059 aaPredicted RBP26.12■■□□□ 1.77
SMARCD1-212ENST00000551966 RARBP10826 455 aa26.12■■□□□ 1.77
SMARCD1-212ENST00000551966 KIF1BPQ96EK5 621 aa26.12■■□□□ 1.77
SMARCD1-212ENST00000551966 EYSQ5T1H1 3165 aa26.12■■□□□ 1.77
SMARCD1-212ENST00000551966 IFIT2P09913 472 aaKnown RBP26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 C16orf86Q6ZW13 317 aa26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 SIRT2Q8IXJ6 389 aa26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 REPS2Q8NFH8 660 aa26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 BOLA2Q9H3K6 86 aa26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 PAG1Q9NWQ8 432 aa26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 DIS3Q9Y2L1 958 aaKnown RBP26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 COL11A1P12107 1806 aaPredicted RBP26.11■■□□□ 1.77
SMARCD1-212ENST00000551966 VWA5AO00534 786 aa26.1■■□□□ 1.77
SMARCD1-212ENST00000551966 KIAA0355O15063 1070 aa26.1■■□□□ 1.77
SMARCD1-212ENST00000551966 CLTBP09497 229 aa26.1■■□□□ 1.77
SMARCD1-212ENST00000551966 STAT3P40763 770 aa26.1■■□□□ 1.77
SMARCD1-212ENST00000551966 BCL11AQ9H165 835 aa26.1■■□□□ 1.77
SMARCD1-212ENST00000551966 ZNF214Q9UL59 606 aaPredicted RBP26.1■■□□□ 1.77
SMARCD1-212ENST00000551966 BAZ2AQ9UIF9 1905 aaKnown RBP26.1■■□□□ 1.77
SMARCD1-212ENST00000551966 A0A1W2PQ45 241 aaPredicted RBP26.09■■□□□ 1.77
SMARCD1-212ENST00000551966 A0A1W2PQY0 241 aa26.09■■□□□ 1.77
SMARCD1-212ENST00000551966 KCTD2Q14681 263 aa26.09■■□□□ 1.77
SMARCD1-212ENST00000551966 RNF180Q86T96 592 aa26.09■■□□□ 1.77
SMARCD1-212ENST00000551966 LENG1Q96BZ8 264 aaPredicted RBP26.09■■□□□ 1.77
SMARCD1-212ENST00000551966 KANSL2Q9H9L4 492 aa26.09■■□□□ 1.77
SMARCD1-212ENST00000551966 PPP1R9AQ9ULJ8 1098 aa26.09■■□□□ 1.77
SMARCD1-212ENST00000551966 MYH8P13535 1937 aa26.08■■□□□ 1.77
SMARCD1-212ENST00000551966 ADAMTS4O75173 837 aa26.08■■□□□ 1.77
SMARCD1-212ENST00000551966 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.08■■□□□ 1.77
SMARCD1-212ENST00000551966 PQBP1O60828 265 aaKnown RBP26.07■■□□□ 1.76
SMARCD1-212ENST00000551966 HNRNPUQ00839 825 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMARCD1-212ENST00000551966 FAAP100Q0VG06 881 aa26.07■■□□□ 1.76
SMARCD1-212ENST00000551966 FAM83BQ5T0W9 1011 aa26.07■■□□□ 1.76
SMARCD1-212ENST00000551966 CTR9Q6PD62 1173 aa26.07■■□□□ 1.76
SMARCD1-212ENST00000551966 RPAP2Q8IXW5 612 aaPredicted RBP26.07■■□□□ 1.76
SMARCD1-212ENST00000551966 RNPC3Q96LT9 517 aaKnown RBP26.07■■□□□ 1.76
SMARCD1-212ENST00000551966 AKR1A1P14550 325 aa26.06■■□□□ 1.76
SMARCD1-212ENST00000551966 RAG1P15918 1043 aa26.06■■□□□ 1.76
SMARCD1-212ENST00000551966 ATP5JP18859 108 aa26.06■■□□□ 1.76
SMARCD1-212ENST00000551966 PLXNA1Q9UIW2 1896 aa26.06■■□□□ 1.76
SMARCD1-212ENST00000551966 SNAI1O95863 264 aaPredicted RBP26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 FOSL2P15408 326 aa26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 UBE3CQ15386 1083 aa26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 HAUS7Q99871 368 aa26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 TSEN34Q9BSV6 310 aaKnown RBP26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 TMEM39AQ9NV64 488 aa26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 SLC4A4Q9Y6R1 1079 aa26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 ZBED9Q6R2W3 1325 aa26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 ROBO3Q96MS0 1386 aa26.05■■□□□ 1.76
SMARCD1-212ENST00000551966 VCANP13611 3396 aa26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 ACLYP53396 1101 aa26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 CCSAPQ6IQ19 270 aaPredicted RBP26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 ANKRD33Q7Z3H0 272 aa26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 KLHDC9Q8NEP7 349 aa26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 TOX2Q96NM4 488 aa26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 PUS7LQ9H0K6 701 aaKnown RBP26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 GOPCQ9HD26 462 aa26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 RIPK3Q9Y572 518 aa26.04■■□□□ 1.76
SMARCD1-212ENST00000551966 PRUNE2Q8WUY3 3088 aa26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 RAD21O60216 631 aa26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 RAB11FIP3O75154 756 aa26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 IRX5P78411 483 aaPredicted RBP26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 FPGSQ05932 587 aa26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 GRIN2CQ14957 1233 aa26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 NUP88Q99567 741 aaPredicted RBP26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 CNPY2Q9Y2B0 182 aa26.03■■□□□ 1.76
SMARCD1-212ENST00000551966 TMEM265A0A087WTH1 108 aa26.02■■□□□ 1.76
SMARCD1-212ENST00000551966 KCNA10Q16322 511 aa26.02■■□□□ 1.76
SMARCD1-212ENST00000551966 AMOTL1Q8IY63 956 aa26.02■■□□□ 1.76
SMARCD1-212ENST00000551966 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms