RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 CNGA1P29973 690 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 PLS1Q14651 629 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 UBE3CQ15386 1083 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 C12orf60Q5U649 245 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 TMEM179Q6ZVK1 233 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 OGDHLQ9ULD0 1010 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
LETMD1-228ENST00000550929 SLC15A5A6NIM6 579 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 CYP2C19P33261 490 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 ICA1Q05084 483 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 COG2Q14746 738 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 CTR9Q6PD62 1173 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 LBX2Q6XYB7 198 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 TRMT44Q8IYL2 757 aaKnown RBP10.88□□□□□ -0.67
LETMD1-228ENST00000550929 ANKLE1Q8NAG6 615 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 ATG4CQ96DT6 458 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 DDRGK1Q96HY6 314 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 MOV10L1Q9BXT6 1211 aaKnown RBP10.88□□□□□ -0.67
LETMD1-228ENST00000550929 PRO3102Q9H379 93 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 ARHGEF10LQ9HCE6 1279 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 ECHDC1Q9NTX5 307 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 HOXC10Q9NYD6 342 aa10.88□□□□□ -0.67
LETMD1-228ENST00000550929 NAV1Q8NEY1 1877 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 PFASO15067 1338 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 MINDY4BA8MYZ0 360 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 FLOT1O75955 427 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 EEF2P13639 858 aaKnown RBP10.87□□□□□ -0.67
LETMD1-228ENST00000550929 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
LETMD1-228ENST00000550929 CAPN2P17655 700 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 ERCC3P19447 782 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 MFSD14CQ5VZR4 134 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 ANO1Q5XXA6 986 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 DPP9Q86TI2 863 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 OSBP2Q969R2 916 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 STRBPQ96SI9 672 aaKnown RBP10.87□□□□□ -0.67
LETMD1-228ENST00000550929 DCTPP1Q9H773 170 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 VCPKMTQ9H867 229 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 TMX2Q9Y320 296 aa10.87□□□□□ -0.67
LETMD1-228ENST00000550929 DDX60LQ5H9U9 1706 aaKnown RBP10.86□□□□□ -0.67
LETMD1-228ENST00000550929 ADORA2AP29274 412 aa10.86□□□□□ -0.67
LETMD1-228ENST00000550929 GRB14Q14449 540 aa10.86□□□□□ -0.67
LETMD1-228ENST00000550929 NCAPG2Q86XI2 1143 aa10.86□□□□□ -0.67
LETMD1-228ENST00000550929 TRPV1Q8NER1 839 aa10.86□□□□□ -0.67
LETMD1-228ENST00000550929 CCDC17Q96LX7 622 aa10.86□□□□□ -0.67
LETMD1-228ENST00000550929 SPATC1LQ9H0A9 340 aa10.86□□□□□ -0.67
LETMD1-228ENST00000550929 FBXO28Q9NVF7 368 aa10.86□□□□□ -0.67
LETMD1-228ENST00000550929 GSG1L2A8MUP6 293 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 SOX1O00570 391 aaPredicted RBP10.85□□□□□ -0.67
LETMD1-228ENST00000550929 COBLO75128 1261 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 LRRC26Q2I0M4 334 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 PRAMEF19Q5SWL8 479 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 KBTBD3Q8NAB2 608 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 OTUD7AQ8TE49 926 aaPredicted RBP10.85□□□□□ -0.67
LETMD1-228ENST00000550929 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 MKNK2Q9HBH9 465 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 PCDHB15Q9Y5E8 787 aa10.85□□□□□ -0.67
LETMD1-228ENST00000550929 M0R2C6 588 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 RNF113AO15541 343 aaKnown RBP10.84□□□□□ -0.67
LETMD1-228ENST00000550929 APPP05067 770 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 HOXC6P09630 235 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 EMP3P54852 163 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 TMEM132BQ14DG7 1078 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 APPBP2Q92624 585 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 LPAR1Q92633 364 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 GPATCH3Q96I76 525 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 SEC62Q99442 399 aaKnown RBP10.84□□□□□ -0.67
LETMD1-228ENST00000550929 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-228ENST00000550929 GDF15Q99988 308 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
LETMD1-228ENST00000550929 SENP6Q9GZR1 1112 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-228ENST00000550929 SH2D4AQ9H788 454 aa10.84□□□□□ -0.67
LETMD1-228ENST00000550929 DDX20Q9UHI6 824 aaKnown RBP10.84□□□□□ -0.67
LETMD1-228ENST00000550929 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
LETMD1-228ENST00000550929 GPAA1O43292 621 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 PRDM1O75626 825 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 COL6A1P12109 1028 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 RASA1P20936 1047 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 MAGEA10P43363 369 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-228ENST00000550929 TDO2P48775 406 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-228ENST00000550929 SHCBP1Q8NEM2 672 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 CHMP4CQ96CF2 233 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 KANSL2Q9H9L4 492 aa10.83□□□□□ -0.68
LETMD1-228ENST00000550929 EPB41L4AQ9HCS5 686 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-228ENST00000550929 ARPP21Q9UBL0 812 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-228ENST00000550929 BAZ2AQ9UIF9 1905 aaKnown RBP10.82□□□□□ -0.68
LETMD1-228ENST00000550929 STRNO43815 780 aa10.82□□□□□ -0.68
LETMD1-228ENST00000550929 PGK2P07205 417 aa10.82□□□□□ -0.68
LETMD1-228ENST00000550929 CYBAP13498 195 aa10.82□□□□□ -0.68
LETMD1-228ENST00000550929 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
LETMD1-228ENST00000550929 SBK1Q52WX2 424 aa10.82□□□□□ -0.68
LETMD1-228ENST00000550929 MB21D1Q8N884 522 aa10.82□□□□□ -0.68
LETMD1-228ENST00000550929 MMP19Q99542 508 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms