RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.05■■□□□ 1.76
SMARCC2-210ENST00000550519 FBXO28Q9NVF7 368 aa26.05■■□□□ 1.76
SMARCC2-210ENST00000550519 ARPP21Q9UBL0 812 aaPredicted RBP26.05■■□□□ 1.76
SMARCC2-210ENST00000550519 COL6A3P12111 3177 aa26.04■■□□□ 1.76
SMARCC2-210ENST00000550519 SBK1Q52WX2 424 aa26.04■■□□□ 1.76
SMARCC2-210ENST00000550519 SAMD1Q6SPF0 538 aaPredicted RBP26.04■■□□□ 1.76
SMARCC2-210ENST00000550519 GOPCQ9HD26 462 aa26.04■■□□□ 1.76
SMARCC2-210ENST00000550519 MYH8P13535 1937 aa26.04■■□□□ 1.76
SMARCC2-210ENST00000550519 RTP1P59025 263 aa26.03■■□□□ 1.76
SMARCC2-210ENST00000550519 PRAMEF19Q5SWL8 479 aa26.03■■□□□ 1.76
SMARCC2-210ENST00000550519 ANO1Q5XXA6 986 aa26.03■■□□□ 1.76
SMARCC2-210ENST00000550519 RIOX2Q8IUF8 465 aa26.03■■□□□ 1.76
SMARCC2-210ENST00000550519 PPP1R9AQ9ULJ8 1098 aa26.03■■□□□ 1.76
SMARCC2-210ENST00000550519 GSG1L2A8MUP6 293 aa26.02■■□□□ 1.76
SMARCC2-210ENST00000550519 VWA5AO00534 786 aa26.02■■□□□ 1.76
SMARCC2-210ENST00000550519 GIMAP6Q6P9H5 292 aa26.02■■□□□ 1.76
SMARCC2-210ENST00000550519 Q7L0L9 218 aa26.02■■□□□ 1.76
SMARCC2-210ENST00000550519 KBTBD3Q8NAB2 608 aa26.02■■□□□ 1.76
SMARCC2-210ENST00000550519 SLC17A8Q8NDX2 589 aa26.02■■□□□ 1.76
SMARCC2-210ENST00000550519 KBTBD13C9JR72 458 aa26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 SLC39A5Q6ZMH5 540 aa26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 REPS2Q8NFH8 660 aa26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 OSBP2Q969R2 916 aa26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 MMP19Q99542 508 aa26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 LBHD1Q9BQE6 289 aaPredicted RBP26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 NRBP1Q9UHY1 535 aa26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 ZNF214Q9UL59 606 aaPredicted RBP26.01■■□□□ 1.75
SMARCC2-210ENST00000550519 MYH7P12883 1935 aa26■■□□□ 1.75
SMARCC2-210ENST00000550519 PARP14Q460N5 1801 aa26■■□□□ 1.75
SMARCC2-210ENST00000550519 RASA1P20936 1047 aa26■■□□□ 1.75
SMARCC2-210ENST00000550519 STAT3P40763 770 aa26■■□□□ 1.75
SMARCC2-210ENST00000550519 FAM83BQ5T0W9 1011 aa26■■□□□ 1.75
SMARCC2-210ENST00000550519 DCTPP1Q9H773 170 aa26■■□□□ 1.75
SMARCC2-210ENST00000550519 MTMR10Q9NXD2 777 aa26■■□□□ 1.75
SMARCC2-210ENST00000550519 DIS3Q9Y2L1 958 aaKnown RBP26■■□□□ 1.75
SMARCC2-210ENST00000550519 SNX17Q15036 470 aa25.99■■□□□ 1.75
SMARCC2-210ENST00000550519 APPBP2Q92624 585 aa25.99■■□□□ 1.75
SMARCC2-210ENST00000550519 NYAP2Q9P242 653 aa25.99■■□□□ 1.75
SMARCC2-210ENST00000550519 PRKAG2Q9UGJ0 569 aa25.99■■□□□ 1.75
SMARCC2-210ENST00000550519 ATP11BQ9Y2G3 1177 aa25.99■■□□□ 1.75
SMARCC2-210ENST00000550519 ROBO3Q96MS0 1386 aa25.98■■□□□ 1.75
SMARCC2-210ENST00000550519 PGK2P07205 417 aa25.98■■□□□ 1.75
SMARCC2-210ENST00000550519 KCTD2Q14681 263 aa25.98■■□□□ 1.75
SMARCC2-210ENST00000550519 LRRC41Q15345 812 aa25.98■■□□□ 1.75
SMARCC2-210ENST00000550519 ZNF792Q3KQV3 632 aa25.98■■□□□ 1.75
SMARCC2-210ENST00000550519 FAM47AQ5JRC9 791 aa25.98■■□□□ 1.75
SMARCC2-210ENST00000550519 RAD21O60216 631 aa25.97■■□□□ 1.75
SMARCC2-210ENST00000550519 COPB2P35606 906 aa25.97■■□□□ 1.75
SMARCC2-210ENST00000550519 GPATCH3Q96I76 525 aa25.97■■□□□ 1.75
SMARCC2-210ENST00000550519 TINF2Q9BSI4 451 aa25.97■■□□□ 1.75
SMARCC2-210ENST00000550519 MKNK2Q9HBH9 465 aa25.97■■□□□ 1.75
SMARCC2-210ENST00000550519 RNF113AO15541 343 aaKnown RBP25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 ADCYAP1R1P41586 468 aa25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 C1orf53Q5VUE5 145 aa25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 TSHZ3Q63HK5 1081 aa25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 NUP88Q99567 741 aaPredicted RBP25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 EPB41L4AQ9HCS5 686 aaPredicted RBP25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 STXBP5LQ9Y2K9 1186 aa25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 GREB1LQ9C091 1923 aaPredicted RBP25.96■■□□□ 1.75
SMARCC2-210ENST00000550519 MINDY4BA8MYZ0 360 aa25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 F5H6K3 240 aa25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 GPAA1O43292 621 aa25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 MYCNP04198 464 aaPredicted RBP25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 ZFYP08048 801 aaPredicted RBP25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 KLRC3Q07444 240 aa25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 STK11IPQ8N1F8 1099 aa25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 SLF1Q9BQI6 1058 aa25.95■■□□□ 1.74
SMARCC2-210ENST00000550519 COL11A1P12107 1806 aaPredicted RBP25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 IGKV6D-41A0A0C4DH26 115 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 POTEB2H3BUK9 544 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 NDUFB10O96000 172 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 RARBP10826 455 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 TRIM60Q495X7 471 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 FERMT2Q96AC1 680 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 TEX13BQ9BXU2 312 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 A0A0C4DFX4 3053 aa25.94■■□□□ 1.74
SMARCC2-210ENST00000550519 ZNFX1Q9P2E3 1918 aaKnown RBP25.93■■□□□ 1.74
SMARCC2-210ENST00000550519 ZNF865P0CJ78 1059 aaPredicted RBP25.93■■□□□ 1.74
SMARCC2-210ENST00000550519 TAL1P17542 331 aaPredicted RBP25.93■■□□□ 1.74
SMARCC2-210ENST00000550519 GNAT2P19087 354 aa25.93■■□□□ 1.74
SMARCC2-210ENST00000550519 FAM109BQ6ICB4 259 aaPredicted RBP25.93■■□□□ 1.74
SMARCC2-210ENST00000550519 XPNPEP3Q9NQH7 507 aa25.93■■□□□ 1.74
SMARCC2-210ENST00000550519 PHF24Q9UPV7 400 aa25.93■■□□□ 1.74
SMARCC2-210ENST00000550519 PRPF38AQ8NAV1 312 aaKnown RBP25.92■■□□□ 1.74
SMARCC2-210ENST00000550519 PDLIM7Q9NR12 457 aa25.92■■□□□ 1.74
SMARCC2-210ENST00000550519 CLIP2Q9UDT6 1046 aa25.92■■□□□ 1.74
SMARCC2-210ENST00000550519 RIPK3Q9Y572 518 aa25.92■■□□□ 1.74
SMARCC2-210ENST00000550519 M0R2C6 588 aa25.91■■□□□ 1.74
SMARCC2-210ENST00000550519 ATP2A1O14983 1001 aa25.91■■□□□ 1.74
SMARCC2-210ENST00000550519 SNRNP48Q6IEG0 339 aaKnown RBP25.91■■□□□ 1.74
SMARCC2-210ENST00000550519 MSL3Q8N5Y2 521 aaKnown RBP25.91■■□□□ 1.74
SMARCC2-210ENST00000550519 MKL1Q969V6 931 aa25.91■■□□□ 1.74
SMARCC2-210ENST00000550519 ZNF287Q9HBT7 754 aa25.91■■□□□ 1.74
SMARCC2-210ENST00000550519 PRDM5Q9NQX1 630 aaPredicted RBP25.91■■□□□ 1.74
SMARCC2-210ENST00000550519 LAMA2P24043 3122 aaKnown RBP25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 PATL2C9JE40 543 aaKnown RBP25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 PGK1P00558 417 aa25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 AKR1A1P14550 325 aa25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 TDO2P48775 406 aa25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 RNF180Q86T96 592 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms