RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
PFDN5-210ENST00000550513 GOPCQ9HD26 462 aa13.04□□□□□ -0.32
PFDN5-210ENST00000550513 LAMA2P24043 3122 aaKnown RBP13.04□□□□□ -0.32
PFDN5-210ENST00000550513 ROBO3Q96MS0 1386 aa13.04□□□□□ -0.32
PFDN5-210ENST00000550513 SEPT4O43236 478 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-210ENST00000550513 COBLO75128 1261 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 FCER1AP12319 257 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 RTP1P59025 263 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-210ENST00000550513 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 Q7L0L9 218 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 DEFB123Q8N688 67 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 ARRDC4Q8NCT1 418 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 MAML3Q96JK9 1138 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-210ENST00000550513 PUS7LQ9H0K6 701 aaKnown RBP13.03□□□□□ -0.32
PFDN5-210ENST00000550513 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 PRKAG2Q9UGJ0 569 aa13.03□□□□□ -0.32
PFDN5-210ENST00000550513 LCTP09848 1927 aa13.02□□□□□ -0.32
PFDN5-210ENST00000550513 RAD21O60216 631 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 SLC25A27O95847 323 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-210ENST00000550513 C20orf194Q5TEA3 1177 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 CTR9Q6PD62 1173 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 MMP19Q99542 508 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
PFDN5-210ENST00000550513 A0A0C4DFX4 3053 aa13.01□□□□□ -0.33
PFDN5-210ENST00000550513 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
PFDN5-210ENST00000550513 FAM83BQ5T0W9 1011 aa13.01□□□□□ -0.33
PFDN5-210ENST00000550513 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
PFDN5-210ENST00000550513 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
PFDN5-210ENST00000550513 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
PFDN5-210ENST00000550513 GBF1Q92538 1859 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 COPB2P35606 906 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 KCTD2Q14681 263 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 PRAMEF19Q5SWL8 479 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 KBTBD3Q8NAB2 608 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 APPBP2Q92624 585 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 PRDM5Q9NQX1 630 aaPredicted RBP13□□□□□ -0.33
PFDN5-210ENST00000550513 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
PFDN5-210ENST00000550513 ADAMTS5Q9UNA0 930 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 UNC80Q8N2C7 3258 aa13□□□□□ -0.33
PFDN5-210ENST00000550513 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 VWA5AO00534 786 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 PGK2P07205 417 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 RASA1P20936 1047 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 SNX17Q15036 470 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 LRRC41Q15345 812 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 TRIM60Q495X7 471 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 SLC39A5Q6ZMH5 540 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 STRBPQ96SI9 672 aaKnown RBP12.99□□□□□ -0.33
PFDN5-210ENST00000550513 SLF1Q9BQI6 1058 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
PFDN5-210ENST00000550513 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 MTMR10Q9NXD2 777 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 NRBP1Q9UHY1 535 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 STXBP5LQ9Y2K9 1186 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 CDH23Q9H251 3354 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 EYSQ5T1H1 3165 aa12.99□□□□□ -0.33
PFDN5-210ENST00000550513 GSG1L2A8MUP6 293 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 GPAA1O43292 621 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 RARBP10826 455 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 STAT3P40763 770 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 ADCYAP1R1P41586 468 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 TDO2P48775 406 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 GIMAP6Q6P9H5 292 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-210ENST00000550513 TINF2Q9BSI4 451 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 EPB41L4AQ9HCS5 686 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-210ENST00000550513 XPNPEP3Q9NQH7 507 aa12.98□□□□□ -0.33
PFDN5-210ENST00000550513 DIS3Q9Y2L1 958 aaKnown RBP12.98□□□□□ -0.33
PFDN5-210ENST00000550513 PLIN4Q96Q06 1357 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 ZFYP08048 801 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-210ENST00000550513 AKR1A1P14550 325 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 GNAT2P19087 354 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-210ENST00000550513 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 SNRNP48Q6IEG0 339 aaKnown RBP12.97□□□□□ -0.33
PFDN5-210ENST00000550513 OSBP2Q969R2 916 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 TEX13BQ9BXU2 312 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 ZNF287Q9HBT7 754 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 PDLIM7Q9NR12 457 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 NYAP2Q9P242 653 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 MYH6P13533 1939 aa12.97□□□□□ -0.33
PFDN5-210ENST00000550513 F5H6K3 240 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 M0R2C6 588 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 DLL1O00548 723 aa12.96□□□□□ -0.33
PFDN5-210ENST00000550513 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms