RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ABT1Q9ULW3 272 aaKnown RBP11.99□□□□□ -0.49
RAB5C-207ENST00000550504 SYNPO2Q9UMS6 1093 aa11.99□□□□□ -0.49
RAB5C-207ENST00000550504 NID2Q14112 1375 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 CPLX1O14810 134 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 IRF6O14896 467 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 DHX16O60231 1041 aaKnown RBP11.98□□□□□ -0.49
RAB5C-207ENST00000550504 PLEKHA8P1O95397 391 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 SNHG28P0DPA3 235 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 GJA5P36382 358 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 RCAN1P53805 252 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 HMGCS2P54868 508 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 BACE1P56817 501 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 MKRN3Q13064 507 aaKnown RBP11.98□□□□□ -0.49
RAB5C-207ENST00000550504 CUL4AQ13619 759 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 FAM83BQ5T0W9 1011 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 KCTD1Q719H9 257 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 MAP3K14Q99558 947 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 CPVLQ9H3G5 476 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
RAB5C-207ENST00000550504 RBM28Q9NW13 759 aaKnown RBP11.98□□□□□ -0.49
RAB5C-207ENST00000550504 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 PALM3A6NDB9 673 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-207ENST00000550504 TMEM88BA6NKF7 163 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 C19orf81C9J6K1 198 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 KLRF2D3W0D1 207 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 JAK2O60674 1132 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 CTDNEP1O95476 244 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 BMP3P12645 472 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 USP14P54578 494 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 IKQ13123 557 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-207ENST00000550504 PPIL2Q13356 520 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 ASPRV1Q53RT3 343 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 TTBK2Q6IQ55 1244 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 CPLX2Q6PUV4 134 aaKnown RBP11.97□□□□□ -0.49
RAB5C-207ENST00000550504 TMTC3Q6ZXV5 915 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 SAPCD2Q86UD0 394 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 PHKBQ93100 1093 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 GMCL1Q96IK5 515 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 IPO9Q96P70 1041 aaKnown RBP11.97□□□□□ -0.49
RAB5C-207ENST00000550504 UBA5Q9GZZ9 404 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 TMOD4Q9NZQ9 345 aa11.97□□□□□ -0.49
RAB5C-207ENST00000550504 PTPDC1A2A3K4 754 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 TMEM232C9JQI7 657 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 CXCL11O14625 94 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 VCAM1P19320 739 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 SLC16A2P36021 539 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 GNAQP50148 359 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 ZNF157P51786 506 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-207ENST00000550504 PPP2R5BQ15173 497 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 GPATCH4Q5T3I0 446 aaKnown RBP11.96□□□□□ -0.49
RAB5C-207ENST00000550504 SPRYD7Q5W111 196 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-207ENST00000550504 GADL1Q6ZQY3 521 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 NBPF11Q86T75 865 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 SRBD1Q8N5C6 995 aaKnown RBP11.96□□□□□ -0.49
RAB5C-207ENST00000550504 NSUN7Q8NE18 718 aaKnown RBP11.96□□□□□ -0.49
RAB5C-207ENST00000550504 PIBF1Q8WXW3 757 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 LPAR1Q92633 364 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 DDX11Q96FC9 970 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-207ENST00000550504 VAT1LQ9HCJ6 419 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-207ENST00000550504 TLL2Q9Y6L7 1015 aa11.96□□□□□ -0.49
RAB5C-207ENST00000550504 A0A0G2JLL6 359 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-207ENST00000550504 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 WDR46O15213 610 aaKnown RBP11.95□□□□□ -0.5
RAB5C-207ENST00000550504 CDKL5O76039 1030 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 IFNAR1P17181 557 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 NTRK3Q16288 839 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 SLC35G1Q2M3R5 365 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 SH3D19Q5HYK7 790 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 RGMBQ6NW40 437 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-207ENST00000550504 PRRT2Q7Z6L0 340 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-207ENST00000550504 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 C12orf42Q96LP6 360 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
RAB5C-207ENST00000550504 SLC26A6Q9BXS9 759 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 TANGO6Q9C0B7 1094 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 SMC3Q9UQE7 1217 aa11.95□□□□□ -0.5
RAB5C-207ENST00000550504 PTPRFP10586 1907 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 CNTNAP5Q8WYK1 1306 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 CYTH3O43739 400 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 GJB2P29033 226 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 STAT2P52630 851 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 FOSBP53539 338 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 SSRP1Q08945 709 aaKnown RBP11.94□□□□□ -0.5
RAB5C-207ENST00000550504 FUT2Q10981 343 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 GRM1Q13255 1194 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 TREML2Q5T2D2 321 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 ADGRF4Q8IZF3 695 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
RAB5C-207ENST00000550504 LZTS2Q9BRK4 669 aa11.94□□□□□ -0.5
RAB5C-207ENST00000550504 FBXO28Q9NVF7 368 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms