RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 BRCA2P51587 3418 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 FDX1P10109 184 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 FCER1AP12319 257 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 ADORA2AP29274 412 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 PPARAQ07869 468 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 NCAPG2Q86XI2 1143 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 RIOX2Q8IUF8 465 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 CLEC10AQ8IUN9 316 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 NEDD1Q8NHV4 660 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 A0A0G2JMZ2 1700 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 ZNF236Q9UL36 1845 aa23.72■■□□□ 1.39
GCN1-207ENST00000550471 IGKV6D-41A0A0C4DH26 115 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 F5H6K3 240 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 SMIM22K7EJ46 135 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 VWA5AO00534 786 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 RAD21O60216 631 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 TSPY3P0CV98 308 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 TSPY8P0CW00 308 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 KLRC3Q07444 240 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 CCL14Q16627 93 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 PRPF38AQ8NAV1 312 aaKnown RBP23.71■■□□□ 1.39
GCN1-207ENST00000550471 GMCL1P1Q8NEA9 526 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 SLF1Q9BQI6 1058 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 C11orf49Q9H6J7 331 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 MTMR4Q9NYA4 1195 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 NRBP1Q9UHY1 535 aa23.71■■□□□ 1.39
GCN1-207ENST00000550471 STAT3P40763 770 aa23.7■■□□□ 1.38
GCN1-207ENST00000550471 MFAP1P55081 439 aaKnown RBP23.7■■□□□ 1.38
GCN1-207ENST00000550471 ALX1Q15699 326 aa23.7■■□□□ 1.38
GCN1-207ENST00000550471 FAM83BQ5T0W9 1011 aa23.7■■□□□ 1.38
GCN1-207ENST00000550471 PCDH10Q9P2E7 1040 aa23.7■■□□□ 1.38
GCN1-207ENST00000550471 CLIP2Q9UDT6 1046 aa23.7■■□□□ 1.38
GCN1-207ENST00000550471 DIS3Q9Y2L1 958 aaKnown RBP23.7■■□□□ 1.38
GCN1-207ENST00000550471 GREB1LQ9C091 1923 aaPredicted RBP23.7■■□□□ 1.38
GCN1-207ENST00000550471 KCTD2Q14681 263 aa23.69■■□□□ 1.38
GCN1-207ENST00000550471 TMEM132BQ14DG7 1078 aa23.69■■□□□ 1.38
GCN1-207ENST00000550471 SEC62Q99442 399 aaKnown RBP23.69■■□□□ 1.38
GCN1-207ENST00000550471 FEM1BQ9UK73 627 aa23.69■■□□□ 1.38
GCN1-207ENST00000550471 CTDP1Q9Y5B0 961 aaPredicted RBP23.69■■□□□ 1.38
GCN1-207ENST00000550471 MKI67P46013 3256 aaKnown RBP23.69■■□□□ 1.38
GCN1-207ENST00000550471 RLFQ13129 1914 aa23.69■■□□□ 1.38
GCN1-207ENST00000550471 NT5C2P49902 561 aa23.68■■□□□ 1.38
GCN1-207ENST00000550471 MCMDC2Q4G0Z9 681 aa23.68■■□□□ 1.38
GCN1-207ENST00000550471 LHX8Q68G74 356 aa23.68■■□□□ 1.38
GCN1-207ENST00000550471 NPLOC4Q8TAT6 608 aa23.68■■□□□ 1.38
GCN1-207ENST00000550471 CEP95Q96GE4 821 aa23.68■■□□□ 1.38
GCN1-207ENST00000550471 TEX13BQ9BXU2 312 aa23.68■■□□□ 1.38
GCN1-207ENST00000550471 DDX20Q9UHI6 824 aaKnown RBP23.68■■□□□ 1.38
GCN1-207ENST00000550471 ANAPC4Q9UJX5 808 aa23.68■■□□□ 1.38
GCN1-207ENST00000550471 A0A1W2PPC1 479 aa23.67■■□□□ 1.38
GCN1-207ENST00000550471 ATP2A1O14983 1001 aa23.67■■□□□ 1.38
GCN1-207ENST00000550471 ZBED4O75132 1171 aa23.67■■□□□ 1.38
GCN1-207ENST00000550471 NDUFB10O96000 172 aa23.67■■□□□ 1.38
GCN1-207ENST00000550471 IGHA2P01877 340 aa23.67■■□□□ 1.38
GCN1-207ENST00000550471 CCND3P30281 292 aaPredicted RBP23.67■■□□□ 1.38
GCN1-207ENST00000550471 STK11IPQ8N1F8 1099 aa23.67■■□□□ 1.38
GCN1-207ENST00000550471 OSBPL3Q9H4L5 887 aa23.67■■□□□ 1.38
GCN1-207ENST00000550471 COLQQ9Y215 455 aaPredicted RBP23.67■■□□□ 1.38
GCN1-207ENST00000550471 ZMYM6O95789 1325 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 PRDM1O75626 825 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 PCP11498 1178 aaKnown RBP23.66■■□□□ 1.38
GCN1-207ENST00000550471 OAZ1P54368 228 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 TFAP4Q01664 338 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 SAMD1Q6SPF0 538 aaPredicted RBP23.66■■□□□ 1.38
GCN1-207ENST00000550471 CHD1LQ86WJ1 897 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 MSL3Q8N5Y2 521 aaKnown RBP23.66■■□□□ 1.38
GCN1-207ENST00000550471 MMP19Q99542 508 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 LNPKQ9C0E8 428 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 FLRT1Q9NZU1 646 aa23.66■■□□□ 1.38
GCN1-207ENST00000550471 ZNF214Q9UL59 606 aaPredicted RBP23.66■■□□□ 1.38
GCN1-207ENST00000550471 CEP290O15078 2479 aa23.65■■□□□ 1.38
GCN1-207ENST00000550471 ARRDC4Q8NCT1 418 aa23.65■■□□□ 1.38
GCN1-207ENST00000550471 FBXO28Q9NVF7 368 aa23.65■■□□□ 1.38
GCN1-207ENST00000550471 FBXO40Q9UH90 709 aa23.65■■□□□ 1.38
GCN1-207ENST00000550471 TSPY2A6NKD2 308 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 TRIM6-TRIM34B2RNG4 842 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 HIP1O00291 1037 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 COL6A1P12109 1028 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 CYBAP13498 195 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 CNGA1P29973 690 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 MNX1P50219 401 aaPredicted RBP23.64■■□□□ 1.37
GCN1-207ENST00000550471 NUCB1Q02818 461 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 FAM160B2Q86V87 743 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 REPS2Q8NFH8 660 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 DIS3LQ8TF46 1054 aaKnown RBP23.64■■□□□ 1.37
GCN1-207ENST00000550471 CHURC1Q8WUH1 139 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 MAML3Q96JK9 1138 aa23.64■■□□□ 1.37
GCN1-207ENST00000550471 SEPT4O43236 478 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 ORC4O43929 436 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 PLA2G6O60733 806 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 COBLO75128 1261 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 BMP3P12645 472 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 CYP2C19P33261 490 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 SLFN13Q68D06 897 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 CHRDL2Q6WN34 429 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.63■■□□□ 1.37
GCN1-207ENST00000550471 GMCL1Q96IK5 515 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.63■■□□□ 1.37
GCN1-207ENST00000550471 PARP14Q460N5 1801 aa23.63■■□□□ 1.37
GCN1-207ENST00000550471 DNM1LO00429 736 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms