RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 LNPKQ9C0E8 428 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 KANSL2Q9H9L4 492 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 MKNK2Q9HBH9 465 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 OGDHLQ9ULD0 1010 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 PFASO15067 1338 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 ERC2O15083 957 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 WDR46O15213 610 aaKnown RBP19.03■□□□□ 0.64
COX6A1-203ENST00000550009 IGHA2P01877 340 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 CTDSPL2Q05D32 466 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 ANO1Q5XXA6 986 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 GIMAP6Q6P9H5 292 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 RASGRP2Q7LDG7 609 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 REPS2Q8NFH8 660 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 LPAR1Q92633 364 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 FAM227BQ96M60 508 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 HOXC10Q9NYD6 342 aa19.03■□□□□ 0.64
COX6A1-203ENST00000550009 RBM27Q9P2N5 1060 aaKnown RBP19.03■□□□□ 0.64
COX6A1-203ENST00000550009 FXR1P51114 621 aaKnown RBP eCLIP19.02■□□□□ 0.64
COX6A1-203ENST00000550009 PRAMEF19Q5SWL8 479 aa19.02■□□□□ 0.64
COX6A1-203ENST00000550009 NCAPG2Q86XI2 1143 aa19.02■□□□□ 0.64
COX6A1-203ENST00000550009 LRRC47Q8N1G4 583 aaKnown RBP19.02■□□□□ 0.64
COX6A1-203ENST00000550009 CEP95Q96GE4 821 aa19.02■□□□□ 0.64
COX6A1-203ENST00000550009 CLIP2Q9UDT6 1046 aa19.02■□□□□ 0.64
COX6A1-203ENST00000550009 STAP2Q9UGK3 403 aa19.02■□□□□ 0.64
COX6A1-203ENST00000550009 ADAMTS5Q9UNA0 930 aa19.02■□□□□ 0.64
COX6A1-203ENST00000550009 A0A0D9SFI3 127 aa19.01■□□□□ 0.63
COX6A1-203ENST00000550009 NDUFB10O96000 172 aa19.01■□□□□ 0.63
COX6A1-203ENST00000550009 NECAB2Q7Z6G3 386 aa19.01■□□□□ 0.63
COX6A1-203ENST00000550009 C7orf61Q8IZ16 206 aa19.01■□□□□ 0.63
COX6A1-203ENST00000550009 HTATIP2Q9BUP3 242 aa19.01■□□□□ 0.63
COX6A1-203ENST00000550009 IVNS1ABPQ9Y6Y0 642 aa19.01■□□□□ 0.63
COX6A1-203ENST00000550009 F5H6K3 240 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 NMT2O60551 498 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 PGK2P07205 417 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 HOXC6P09630 235 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 GNAT2P19087 354 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 KLRC3Q07444 240 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 PPARAQ07869 468 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 PRO3102Q9H379 93 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 GOPCQ9HD26 462 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 NYAP2Q9P242 653 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 PPP1R9AQ9ULJ8 1098 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 ZMYND8Q9ULU4 1186 aaPredicted RBP19■□□□□ 0.63
COX6A1-203ENST00000550009 RIPK3Q9Y572 518 aa19■□□□□ 0.63
COX6A1-203ENST00000550009 VWA5AO00534 786 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 EVI5O60447 810 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 SYN1P17600 705 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 DPP9Q86TI2 863 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 ZNF589Q86UQ0 364 aaPredicted RBP18.99■□□□□ 0.63
COX6A1-203ENST00000550009 GCC1Q96CN9 775 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 NAPBQ9H115 298 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 C11orf49Q9H6J7 331 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 SH2D4AQ9H788 454 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 ZNF214Q9UL59 606 aaPredicted RBP18.99■□□□□ 0.63
COX6A1-203ENST00000550009 LCTP09848 1927 aa18.99■□□□□ 0.63
COX6A1-203ENST00000550009 CYBAP13498 195 aa18.98■□□□□ 0.63
COX6A1-203ENST00000550009 CNGA1P29973 690 aa18.98■□□□□ 0.63
COX6A1-203ENST00000550009 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
COX6A1-203ENST00000550009 TRMT44Q8IYL2 757 aaKnown RBP18.98■□□□□ 0.63
COX6A1-203ENST00000550009 ZNF444Q8N0Y2 327 aaPredicted RBP18.98■□□□□ 0.63
COX6A1-203ENST00000550009 SHCBP1Q8NEM2 672 aa18.98■□□□□ 0.63
COX6A1-203ENST00000550009 NBPF3Q9H094 633 aa18.98■□□□□ 0.63
COX6A1-203ENST00000550009 MTMR4Q9NYA4 1195 aa18.98■□□□□ 0.63
COX6A1-203ENST00000550009 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 TFAP4Q01664 338 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 NMIQ13287 307 aaPredicted RBP18.97■□□□□ 0.63
COX6A1-203ENST00000550009 LRRC26Q2I0M4 334 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 MFSD14CQ5VZR4 134 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 SMC5Q8IY18 1101 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 MB21D1Q8N884 522 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 ANKLE1Q8NAG6 615 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 EVI5LQ96CN4 794 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 IL17RBQ9NRM6 502 aa18.97■□□□□ 0.63
COX6A1-203ENST00000550009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
COX6A1-203ENST00000550009 COL6A3P12111 3177 aa18.96■□□□□ 0.63
COX6A1-203ENST00000550009 LAMA4Q16363 1823 aa18.96■□□□□ 0.63
COX6A1-203ENST00000550009 COL6A1P12109 1028 aa18.96■□□□□ 0.63
COX6A1-203ENST00000550009 TAL1P17542 331 aaPredicted RBP18.96■□□□□ 0.63
COX6A1-203ENST00000550009 RIOX2Q8IUF8 465 aa18.96■□□□□ 0.63
COX6A1-203ENST00000550009 NEDD1Q8NHV4 660 aa18.96■□□□□ 0.63
COX6A1-203ENST00000550009 MAML3Q96JK9 1138 aa18.96■□□□□ 0.63
COX6A1-203ENST00000550009 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
COX6A1-203ENST00000550009 PLIN4Q96Q06 1357 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 STAT3P40763 770 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 SNAP25P60880 206 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 PLEKHM2Q8IWE5 1019 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 MKL1Q969V6 931 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 MMP19Q99542 508 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 SLF1Q9BQI6 1058 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 MROH8Q9H579 483 aa18.95■□□□□ 0.62
COX6A1-203ENST00000550009 DDX20Q9UHI6 824 aaKnown RBP18.95■□□□□ 0.62
COX6A1-203ENST00000550009 STRNO43815 780 aa18.94■□□□□ 0.62
COX6A1-203ENST00000550009 TSPY3P0CV98 308 aa18.94■□□□□ 0.62
COX6A1-203ENST00000550009 TSPY8P0CW00 308 aa18.94■□□□□ 0.62
COX6A1-203ENST00000550009 GJC2Q5T442 439 aaPredicted RBP18.94■□□□□ 0.62
COX6A1-203ENST00000550009 OLFML2BQ68BL8 750 aa18.94■□□□□ 0.62
COX6A1-203ENST00000550009 CPXCR1Q8N123 301 aa18.94■□□□□ 0.62
COX6A1-203ENST00000550009 RILPL2Q969X0 211 aa18.94■□□□□ 0.62
COX6A1-203ENST00000550009 KIFC2Q96AC6 838 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms