RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 MRE11P49959 708 aa28.27■■■□□ 2.12
TGFBR1-207ENST00000549766 SHROOM1Q2M3G4 852 aaPredicted RBP28.27■■■□□ 2.12
TGFBR1-207ENST00000549766 BRMS1Q9HCU9 246 aa28.27■■■□□ 2.12
TGFBR1-207ENST00000549766 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.27■■■□□ 2.12
TGFBR1-207ENST00000549766 DDX19AQ9NUU7 478 aaKnown RBP28.27■■■□□ 2.12
TGFBR1-207ENST00000549766 ABCB5Q2M3G0 1257 aa28.26■■■□□ 2.12
TGFBR1-207ENST00000549766 SIAH1Q8IUQ4 282 aa28.26■■■□□ 2.12
TGFBR1-207ENST00000549766 PIBF1Q8WXW3 757 aa28.26■■■□□ 2.12
TGFBR1-207ENST00000549766 GRPEL1Q9HAV7 217 aa28.26■■■□□ 2.12
TGFBR1-207ENST00000549766 VEZTQ9HBM0 779 aa28.26■■■□□ 2.12
TGFBR1-207ENST00000549766 DACT1Q9NYF0 836 aa28.26■■■□□ 2.12
TGFBR1-207ENST00000549766 BAZ2BQ9UIF8 2168 aaKnown RBP28.26■■■□□ 2.11
TGFBR1-207ENST00000549766 TBC1D12O60347 775 aa28.26■■■□□ 2.11
TGFBR1-207ENST00000549766 ZNF543Q08ER8 600 aa28.26■■■□□ 2.11
TGFBR1-207ENST00000549766 RRP1BQ14684 758 aaKnown RBP28.26■■■□□ 2.11
TGFBR1-207ENST00000549766 NR1I2O75469 434 aa28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 EEF2P13639 858 aaKnown RBP28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 GMPSP49915 693 aaPredicted RBP28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 NLRP5P59047 1200 aa28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 SEPT2Q15019 361 aa28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 AXDND1Q5T1B0 1012 aaPredicted RBP28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 WWC2Q6AWC2 1192 aa28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 CCAR1Q8IX12 1150 aaKnown RBP28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 CPVLQ9H3G5 476 aa28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.25■■■□□ 2.114e-6■■□□□ 13.3
TGFBR1-207ENST00000549766 BARHL2Q9NY43 387 aa28.25■■■□□ 2.11
TGFBR1-207ENST00000549766 CALML3P27482 149 aa28.24■■■□□ 2.11
TGFBR1-207ENST00000549766 JAG1P78504 1218 aa28.24■■■□□ 2.11
TGFBR1-207ENST00000549766 TYW1BQ6NUM6 668 aa28.24■■■□□ 2.11
TGFBR1-207ENST00000549766 FHDC1Q9C0D6 1143 aaPredicted RBP28.24■■■□□ 2.11
TGFBR1-207ENST00000549766 GOLPH3LQ9H4A5 285 aa28.24■■■□□ 2.11
TGFBR1-207ENST00000549766 MYH4Q9Y623 1939 aa28.24■■■□□ 2.11
TGFBR1-207ENST00000549766 STXBP3O00186 592 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 GDF11O95390 407 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 MAP3K10Q02779 954 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 EARS2Q5JPH6 523 aaKnown RBP28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 RBM26Q5T8P6 1007 aaKnown RBP28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 ENGASEQ8NFI3 743 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 GPKOWQ92917 476 aaPredicted RBP eCLIP28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 RRP36Q96EU6 259 aaKnown RBP28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 TMEM39BQ9GZU3 492 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 CABP5Q9NP86 173 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 MORC2Q9Y6X9 1032 aaPredicted RBP28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 EGFRP00533 1210 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 GPATCH4Q5T3I0 446 aaKnown RBP28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 GALNT17Q6IS24 598 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 MICALL2Q8IY33 904 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 DAGLBQ8NCG7 672 aa28.23■■■□□ 2.11
TGFBR1-207ENST00000549766 FRMPD2Q68DX3 1309 aaPredicted RBP28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 ZNF541Q9H0D2 1346 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 XRCC6P12956 609 aaKnown RBP eCLIP28.22■■■□□ 2.112e-6■■■■■ 34.5
TGFBR1-207ENST00000549766 ICA1Q05084 483 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 SNW1Q13573 536 aaKnown RBP28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 JMYQ8N9B5 988 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 CCDC148Q8NFR7 591 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 UBA5Q9GZZ9 404 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 NUP62CLQ9H1M0 184 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 CLSTN2Q9H4D0 955 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 PCDHA4Q9UN74 947 aa28.22■■■□□ 2.11
TGFBR1-207ENST00000549766 M0R2N6 131 aa28.21■■■□□ 2.11
TGFBR1-207ENST00000549766 GH2P01242 217 aa28.21■■■□□ 2.11
TGFBR1-207ENST00000549766 RBM43Q6ZSC3 357 aaKnown RBP28.21■■■□□ 2.11
TGFBR1-207ENST00000549766 MRPS27Q92552 414 aaKnown RBP28.21■■■□□ 2.11
TGFBR1-207ENST00000549766 SYNPO2Q9UMS6 1093 aa28.21■■■□□ 2.11
TGFBR1-207ENST00000549766 FAM205CA6NFA0 338 aa28.2■■■□□ 2.11
TGFBR1-207ENST00000549766 ATP2B2Q01814 1243 aa28.2■■■□□ 2.11
TGFBR1-207ENST00000549766 FAM160A1Q05DH4 1040 aa28.2■■■□□ 2.11
TGFBR1-207ENST00000549766 CDAN1Q8IWY9 1227 aa28.2■■■□□ 2.11
TGFBR1-207ENST00000549766 BLIDQ8IZY5 108 aa28.2■■■□□ 2.11
TGFBR1-207ENST00000549766 CNOT7Q9UIV1 285 aaKnown RBP28.2■■■□□ 2.11
TGFBR1-207ENST00000549766 PCDHB6Q9Y5E3 794 aa28.2■■■□□ 2.11
TGFBR1-207ENST00000549766 HEATR3Q7Z4Q2 680 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 FSIP1Q8NA03 581 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 GMCL1P1Q8NEA9 526 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 DCAF4Q8WV16 495 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 PIGSQ96S52 555 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 FUCA2Q9BTY2 467 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 GJA3Q9Y6H8 435 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 hCG_1984214I3L0E3 225 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 ADAMTS3O15072 1205 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 CMA1P23946 247 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 MARCKSP29966 332 aaPredicted RBP28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 TNNI2P48788 182 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 CCDC73Q6ZRK6 1079 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 ZNF713Q8N859 430 aaPredicted RBP28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 ZMYND12Q9H0C1 365 aa28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 SEC63Q9UGP8 760 aaKnown RBP28.19■■■□□ 2.1
TGFBR1-207ENST00000549766 LMNB1P20700 586 aa28.18■■■□□ 2.1
TGFBR1-207ENST00000549766 FMR1NBQ8N0W7 255 aaPredicted RBP28.18■■■□□ 2.1
TGFBR1-207ENST00000549766 RBSNQ9H1K0 784 aa28.18■■■□□ 2.1
TGFBR1-207ENST00000549766 TSPY26PQ9H489 355 aa28.18■■■□□ 2.1
TGFBR1-207ENST00000549766 GPCPD1Q9NPB8 672 aa28.18■■■□□ 2.1
TGFBR1-207ENST00000549766 TRAPPC10P48553 1259 aa28.17■■■□□ 2.1
TGFBR1-207ENST00000549766 NOM1Q5C9Z4 860 aaKnown RBP28.17■■■□□ 2.1
TGFBR1-207ENST00000549766 ARHGAP27Q6ZUM4 889 aa28.17■■■□□ 2.1
TGFBR1-207ENST00000549766 CCDC12Q8WUD4 166 aaPredicted RBP28.17■■■□□ 2.1
TGFBR1-207ENST00000549766 MTMR8Q96EF0 704 aa28.17■■■□□ 2.1
TGFBR1-207ENST00000549766 NOL7Q9UMY1 257 aaKnown RBP28.17■■■□□ 2.1
TGFBR1-207ENST00000549766 CEP131Q9UPN4 1083 aa28.17■■■□□ 2.1
TGFBR1-207ENST00000549766 DICER1Q9UPY3 1922 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms