RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 A0A1W2PRG0 241 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
CCDC38-207ENST00000549752 PPP1R37O75864 691 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 CHGBP05060 677 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
CCDC38-207ENST00000549752 ATP2B2Q01814 1243 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 PDE4BQ07343 736 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 ZMYM1Q5SVZ6 1142 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 NAPBQ9H115 298 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
CCDC38-207ENST00000549752 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 SLC15A5A6NIM6 579 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 M0R2C6 588 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 STRNO43815 780 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 FLOT1O75955 427 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 TFRCP02786 760 aaKnown RBP12.43□□□□□ -0.42
CCDC38-207ENST00000549752 EEF2P13639 858 aaKnown RBP12.43□□□□□ -0.42
CCDC38-207ENST00000549752 CYP2B6P20813 491 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 PDE1AP54750 535 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 EVX2Q03828 476 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 Q3C1V9 767 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 IFNL3Q8IZI9 196 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 DEFB118Q96PH6 123 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 APBA2Q99767 749 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC38-207ENST00000549752 PORCNQ9H237 461 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 PAK6Q9NQU5 681 aaPredicted RBP12.43□□□□□ -0.42
CCDC38-207ENST00000549752 SLC5A4Q9NY91 659 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
CCDC38-207ENST00000549752 FARP2O94887 1054 aaPredicted RBP12.42□□□□□ -0.42
CCDC38-207ENST00000549752 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 MORN1Q5T089 497 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 ANKLE1Q8NAG6 615 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 OTUD7AQ8TE49 926 aaPredicted RBP12.42□□□□□ -0.42
CCDC38-207ENST00000549752 SHISA4Q96DD7 197 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 MROH8Q9H579 483 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 HELLSQ9NRZ9 838 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 NYAP2Q9P242 653 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 ALPK3Q96L96 1907 aa12.42□□□□□ -0.42
CCDC38-207ENST00000549752 LAMA4Q16363 1823 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 SMCHD1A6NHR9 2005 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 RAD21O60216 631 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 CNMDO75829 334 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 SLC25A27O95847 323 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 RASA1P20936 1047 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 PTPREP23469 700 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 COPB2P35606 906 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 MFAP1P55081 439 aaKnown RBP12.41□□□□□ -0.42
CCDC38-207ENST00000549752 MFSD14CQ5VZR4 134 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 SPICE1Q8N0Z3 855 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 TRIB2Q92519 343 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 USP6NLQ92738 828 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 SPATC1LQ9H0A9 340 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 BTBD7Q9P203 1132 aa12.41□□□□□ -0.42
CCDC38-207ENST00000549752 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
CCDC38-207ENST00000549752 PPARAQ07869 468 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 GRB14Q14449 540 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 PLS1Q14651 629 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 CHD1LQ86WJ1 897 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 ABRAQ8N0Z2 381 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 DPF3Q92784 378 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 LNPKQ9C0E8 428 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 EPB41L4AQ9HCS5 686 aaPredicted RBP12.4□□□□□ -0.42
CCDC38-207ENST00000549752 NR2E3Q9Y5X4 410 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 MYH6P13533 1939 aa12.4□□□□□ -0.42
CCDC38-207ENST00000549752 MSCO60682 206 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 PEX10O60683 326 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 TTLL1O95922 423 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 HOXC6P09630 235 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 MCMDC2Q4G0Z9 681 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 MAP3K21Q5TCX8 1036 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 DPP9Q86TI2 863 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
CCDC38-207ENST00000549752 MOV10L1Q9BXT6 1211 aaKnown RBP12.39□□□□□ -0.43
CCDC38-207ENST00000549752 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
CCDC38-207ENST00000549752 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
CCDC38-207ENST00000549752 MCM3APO60318 1980 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 F5H6K3 240 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 HIP1O00291 1037 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 FCER1AP12319 257 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 ERCC3P19447 782 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 NUCB1Q02818 461 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 KLRC3Q07444 240 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 ALX1Q15699 326 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 KIAA1755Q5JYT7 1200 aa12.38□□□□□ -0.43
CCDC38-207ENST00000549752 B4GALNT3Q6L9W6 998 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms