RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 SYNPO2Q9UMS6 1093 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 MYH15Q9Y2K3 1946 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 F5H6K3 240 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 FIBPO43427 364 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 CYTH3O43739 400 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 CTNND1O60716 968 aaKnown RBP13.94□□□□□ -0.18
PTPRR-209ENST00000549308 PRPF40AO75400 957 aaKnown RBP13.94□□□□□ -0.18
PTPRR-209ENST00000549308 SLC1A4P43007 532 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 KLRC3Q07444 240 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 SLC35G1Q2M3R5 365 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 KCTD1Q719H9 257 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 GMCL1P1Q8NEA9 526 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 GOPCQ9HD26 462 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
PTPRR-209ENST00000549308 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
PTPRR-209ENST00000549308 SCN4AP35499 1836 aa13.94□□□□□ -0.18
PTPRR-209ENST00000549308 A0A1W2PRG0 241 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 KIF28PB7ZC32 967 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 ADM5C9JUS6 153 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 NDUFB10O96000 172 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 ECE1P42892 770 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 EAPPQ56P03 285 aaPredicted RBP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 HOMER1Q86YM7 354 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 ACER1Q8TDN7 264 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 ZNF396Q96N95 335 aaPredicted RBP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 RIOX1Q9H6W3 641 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 LMBRD1Q9NUN5 540 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 TMX2Q9Y320 296 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 POLR2AP24928 1970 aaKnown RBP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 INPP5BP32019 993 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 NLRP5P59047 1200 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 TTBK2Q6IQ55 1244 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 CCDC84Q86UT8 332 aaPredicted RBP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 DIS3L2Q8IYB7 885 aaKnown RBP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 GMCL1Q96IK5 515 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 PIGSQ96S52 555 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 WRNIP1Q96S55 665 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 PHF20Q9BVI0 1012 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 TAF1DQ9H5J8 278 aaPredicted RBP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 BRMS1Q9HCU9 246 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 TFIP11Q9UBB9 837 aaKnown RBP13.93□□□□□ -0.18
PTPRR-209ENST00000549308 ZNF112Q9UJU3 913 aa13.93□□□□□ -0.18
PTPRR-209ENST00000549308 WDR90Q96KV7 1748 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 GOLGB1Q14789 3259 aaKnown RBP13.92□□□□□ -0.18
PTPRR-209ENST00000549308 DOCK1Q14185 1865 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 BMP3P12645 472 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 KRT2P35908 639 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 SLC16A2P36021 539 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 IKQ13123 557 aaPredicted RBP13.92□□□□□ -0.18
PTPRR-209ENST00000549308 ZYXQ15942 572 aaKnown RBP13.92□□□□□ -0.18
PTPRR-209ENST00000549308 KRT26Q7Z3Y9 468 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 ADGRF4Q8IZF3 695 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 ZC3H15Q8WU90 426 aaKnown RBP13.92□□□□□ -0.18
PTPRR-209ENST00000549308 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
PTPRR-209ENST00000549308 FEZ1Q99689 392 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 ANP32EQ9BTT0 268 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 SH3GLB2Q9NR46 395 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 TCHHQ07283 1943 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 SSC5DA1L4H1 1573 aa13.92□□□□□ -0.18
PTPRR-209ENST00000549308 BTBD18B2RXH4 712 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 TRAK2O60296 914 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 VEGFAP15692 232 aaPredicted RBP13.91□□□□□ -0.18
PTPRR-209ENST00000549308 PRKG1Q13976 671 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 SKOR2Q2VWA4 1001 aaPredicted RBP13.91□□□□□ -0.18
PTPRR-209ENST00000549308 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 ATL3Q6DD88 541 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 SCYL3Q8IZE3 742 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 CCDC148Q8NFR7 591 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 SHISA4Q96DD7 197 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
PTPRR-209ENST00000549308 VCPKMTQ9H867 229 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 PICK1Q9NRD5 415 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 FZD1Q9UP38 647 aa13.91□□□□□ -0.18
PTPRR-209ENST00000549308 BAZ2BQ9UIF8 2168 aaKnown RBP13.91□□□□□ -0.18
PTPRR-209ENST00000549308 U2AF2P26368 475 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPRR-209ENST00000549308 CALML3P27482 149 aa13.9□□□□□ -0.18
PTPRR-209ENST00000549308 MYSM1Q5VVJ2 828 aa13.9□□□□□ -0.18
PTPRR-209ENST00000549308 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
PTPRR-209ENST00000549308 SPICE1Q8N0Z3 855 aa13.9□□□□□ -0.18
PTPRR-209ENST00000549308 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
PTPRR-209ENST00000549308 GLIS2Q9BZE0 524 aaPredicted RBP13.9□□□□□ -0.18
PTPRR-209ENST00000549308 SCAND2PQ9GZW5 306 aaPredicted RBP13.9□□□□□ -0.18
PTPRR-209ENST00000549308 JMJD4Q9H9V9 463 aa13.9□□□□□ -0.18
PTPRR-209ENST00000549308 POTECB2RU33 542 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 USP17L10C9JJH3 530 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 TMEM232C9JQI7 657 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 hCG_1984214I3L0E3 225 aa13.9□□□□□ -0.19
PTPRR-209ENST00000549308 STXBP3O00186 592 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms