RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 SCG2P13521 617 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 ITPK1Q13572 414 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 NPY5RQ15761 445 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 IL17AQ16552 155 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 TAF3Q5VWG9 929 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 NCAPH2Q6IBW4 605 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 PDE11AQ9HCR9 933 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 ABHD10Q9NUJ1 306 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 LOC102724428A0A0B4J2F2 783 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 SIK1P57059 783 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 ATP2C1P98194 919 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 H3BQF6 201 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 BMP15O95972 392 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 PRDX5P30044 214 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 PBX1P40424 430 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 PRCPP42785 496 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 PARP10Q53GL7 1025 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 RASGRP2Q7LDG7 609 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 PCMTD1Q96MG8 357 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 ANKZF1Q9H8Y5 726 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 CALCOCO1Q9P1Z2 691 aa13.46□□□□□ -0.25
RAPGEF3-219ENST00000549151 RPN1P04843 607 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CEP112Q8N8E3 955 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 FAM84BQ96KN1 310 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 HINFPQ9BQA5 517 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 ABCB6Q9NP58 842 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 MCM9Q9NXL9 1143 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 VPS18Q9P253 973 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 NID2Q14112 1375 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 ITGB4P16144 1822 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 MECOMQ03112 1051 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 PPP2R5BQ15173 497 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CAPZA3Q96KX2 299 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 N4BP1O75113 896 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CALM1P0DP23 149 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CALM2P0DP24 149 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CALM3P0DP25 149 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 RCAN1P53805 252 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 GPS2Q13227 327 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 TMTC1Q8IUR5 882 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CCDC102AQ96A19 550 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 AK7Q96M32 723 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CPVLQ9H3G5 476 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 ANAPC4Q9UJX5 808 aa13.45□□□□□ -0.26
RAPGEF3-219ENST00000549151 CCDC151A5D8V7 595 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 GTPBP6O43824 516 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 USP17L8P0C7I0 530 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 E2F4Q16254 413 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 CYP26C1Q6V0L0 522 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 NOA1Q8NC60 698 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 TNFRSF25Q93038 417 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 TRIM47Q96LD4 638 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 GDAP1L1Q96MZ0 367 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 MTA3Q9BTC8 594 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 TTF2Q9UNY4 1162 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 MINPP1Q9UNW1 487 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 ERCC3P19447 782 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 TAF1P21675 1872 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 PMS1P54277 932 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 VSNL1P62760 191 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 DDB1Q16531 1140 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 INF2Q27J81 1249 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 HEATR3Q7Z4Q2 680 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 CRNKL1Q9BZJ0 848 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 KAT14Q9H8E8 782 aa13.44□□□□□ -0.26
RAPGEF3-219ENST00000549151 COL1A1P02452 1464 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 TTC26A0AVF1 554 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 SRGAP2O75044 1071 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 PARP1P09874 1014 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 UBA7P41226 1012 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 TFAP4Q01664 338 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 RWDD2AQ9UIY3 292 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 ADAM21Q9UKJ8 722 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 ATP8B1O43520 1251 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 DDAH1O94760 285 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 BRD3Q15059 726 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 SKIDA1Q1XH10 827 aa13.43□□□□□ -0.26
RAPGEF3-219ENST00000549151 ZNF658Q5TYW1 1059 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms