RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 TRIM66O15016 1216 aa13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 MYO1BO43795 1136 aa13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 TSR1Q2NL82 804 aaKnown RBP13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 KIAA1328Q86T90 577 aa13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 CEP112Q8N8E3 955 aa13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 DYNLL2Q96FJ2 89 aa13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 GNL3LQ9NVN8 582 aaKnown RBP13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 MCM9Q9NXL9 1143 aa13.96□□□□□ -0.17
SLC38A1-206ENST00000549049 RTL9Q8NET4 1388 aa13.96□□□□□ -0.18
SLC38A1-206ENST00000549049 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 PRDX5P30044 214 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 RAD51AP2Q09MP3 1159 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 CAVIN4Q5BKX8 364 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 CTR9Q6PD62 1173 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 CAGE1Q8TC20 777 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 RIN2Q8WYP3 895 aaPredicted RBP13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 CCDC151A5D8V7 595 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 USP17L8P0C7I0 530 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 INF2Q27J81 1249 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 CCDC122Q5T0U0 273 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 HEATR3Q7Z4Q2 680 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 ANKRD18AQ8IVF6 992 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 FERMT2Q96AC1 680 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 AK7Q96M32 723 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 LCMT1Q9UIC8 334 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 AKAP11Q9UKA4 1901 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 FUT2Q10981 343 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 ERFEQ4G0M1 354 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 HSP90B2PQ58FF3 399 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 CCDC178Q5BJE1 867 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 TCP11X2Q5H9J9 407 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 FOXR1Q6PIV2 292 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 EPN1Q9Y6I3 576 aaPredicted RBP13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 DUSP10Q9Y6W6 482 aa13.95□□□□□ -0.18
SLC38A1-206ENST00000549049 B4DLN1 442 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 PARP1P09874 1014 aaKnown RBP13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 SCG2P13521 617 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 BEND6Q5SZJ8 279 aaPredicted RBP13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 CYP26C1Q6V0L0 522 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 TMTC1Q8IUR5 882 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 CELF1Q92879 486 aaKnown RBP13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 TRIM34Q9BYJ4 488 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 ZNF185O15231 689 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 ERLIN1O75477 346 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 UBA7P41226 1012 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 NPY5RQ15761 445 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 HDXQ7Z353 690 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 RIOK1Q9BRS2 568 aaKnown RBP13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 CCDC87Q9NVE4 849 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 MYO6Q9UM54 1294 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 LUC7L2Q9Y383 392 aaKnown RBP13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 GLI3P10071 1580 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 KIF1AQ12756 1690 aa13.94□□□□□ -0.18
SLC38A1-206ENST00000549049 CCDC194A0A1B0GVG4 234 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 SH3RF1Q7Z6J0 888 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 SLC44A5Q8NCS7 719 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 AGPAT5Q9NUQ2 364 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 TMEM51Q9NW97 253 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 USP17L3A6NCW0 530 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 USP17L4A6NCW7 530 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 TFAP4Q01664 338 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ATP2B2Q01814 1243 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 CASP8Q14790 479 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 USP17L1Q7RTZ2 530 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 SMCR8Q8TEV9 937 aaPredicted RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ZNF335Q9H4Z2 1342 aaPredicted RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ATRNO75882 1429 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 COL18A1P39060 1754 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 PBX1P40424 430 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ARHGAP25P42331 645 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ATP2C1P98194 919 aaPredicted RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 BRD3Q15059 726 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 JADE2Q9NQC1 790 aa13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 MAGEC2Q9UBF1 373 aaPredicted RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 SAP30BPQ9UHR5 308 aaKnown RBP13.93□□□□□ -0.18
SLC38A1-206ENST00000549049 ALS2Q96Q42 1657 aa13.92□□□□□ -0.18
SLC38A1-206ENST00000549049 NDUFA10O95299 355 aa13.92□□□□□ -0.18
SLC38A1-206ENST00000549049 MECOMQ03112 1051 aa13.92□□□□□ -0.18
SLC38A1-206ENST00000549049 ENOX2Q16206 610 aaKnown RBP13.92□□□□□ -0.18
SLC38A1-206ENST00000549049 ANKRD13CQ8N6S4 541 aa13.92□□□□□ -0.18
SLC38A1-206ENST00000549049 MMS19Q96T76 1030 aa13.92□□□□□ -0.18
SLC38A1-206ENST00000549049 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms