RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 USP17L13C9JLJ4 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L11C9JVI0 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L18D6R9N7 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L22D6RA61 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L17D6RBQ6 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L19D6RCP7 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L20D6RJB6 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 BMP3P12645 472 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 SLC1A4P43007 532 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L24Q0WX57 530 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 PABPC4Q13310 644 aaKnown RBP eCLIP24.66■■□□□ 1.54
CACNB3-210ENST00000548874 APOA5Q6Q788 366 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 CATSPERGQ6ZRH7 1159 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 MTMR7Q9Y216 660 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 SLC12A7Q9Y666 1083 aa24.66■■□□□ 1.54
CACNB3-210ENST00000548874 PDHXO00330 501 aa24.65■■□□□ 1.54
CACNB3-210ENST00000548874 ZNF543Q08ER8 600 aa24.65■■□□□ 1.54
CACNB3-210ENST00000548874 APOBRQ0VD83 1088 aa24.65■■□□□ 1.54
CACNB3-210ENST00000548874 IL27Q8NEV9 243 aa24.65■■□□□ 1.54
CACNB3-210ENST00000548874 MAP3K14Q99558 947 aa24.65■■□□□ 1.54
CACNB3-210ENST00000548874 KLF18A0A0U1RQI7 1052 aa24.64■■□□□ 1.54
CACNB3-210ENST00000548874 RCAN1P53805 252 aa24.64■■□□□ 1.54
CACNB3-210ENST00000548874 AK2P54819 239 aa24.64■■□□□ 1.54
CACNB3-210ENST00000548874 GRM4Q14833 912 aa24.64■■□□□ 1.54
CACNB3-210ENST00000548874 OTUD7BQ6GQQ9 843 aa24.64■■□□□ 1.54
CACNB3-210ENST00000548874 MYL10Q9BUA6 226 aa24.64■■□□□ 1.54
CACNB3-210ENST00000548874 PLA2G6O60733 806 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 ANKRD1Q15327 319 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 CCDC96Q2M329 555 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 ASPRV1Q53RT3 343 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 GPATCH4Q5T3I0 446 aaKnown RBP24.63■■□□□ 1.53
CACNB3-210ENST00000548874 KCTD1Q719H9 257 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 CHMP4CQ96CF2 233 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 TANGO6Q9C0B7 1094 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 ASCC2Q9H1I8 757 aaPredicted RBP24.63■■□□□ 1.53
CACNB3-210ENST00000548874 RLFQ13129 1914 aa24.63■■□□□ 1.53
CACNB3-210ENST00000548874 PALM3A6NDB9 673 aaPredicted RBP24.62■■□□□ 1.53
CACNB3-210ENST00000548874 ALDH1A1P00352 501 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 CALM1P0DP23 149 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 CALM2P0DP24 149 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 CALM3P0DP25 149 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 OSBPP22059 807 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 SYNE3Q6ZMZ3 975 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 MAD2L2Q9UI95 211 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 FEM1BQ9UK73 627 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 PNMA3Q9UL41 463 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 PARP14Q460N5 1801 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 NID2Q14112 1375 aa24.62■■□□□ 1.53
CACNB3-210ENST00000548874 FRMPD2Q68DX3 1309 aaPredicted RBP24.61■■□□□ 1.53
CACNB3-210ENST00000548874 MYPNQ86TC9 1320 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 TMEM232C9JQI7 657 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 ZBTB43O43298 467 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 PARP1P09874 1014 aaKnown RBP24.61■■□□□ 1.53
CACNB3-210ENST00000548874 IRX3P78415 501 aaPredicted RBP24.61■■□□□ 1.53
CACNB3-210ENST00000548874 BTNL9Q6UXG8 535 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 MICU3Q86XE3 530 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 NUP133Q8WUM0 1156 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 FBXO28Q9NVF7 368 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 HPS5Q9UPZ3 1129 aa24.61■■□□□ 1.53
CACNB3-210ENST00000548874 FLOT1O75955 427 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 GOLGA8HP0CJ92 632 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 RXRAP19793 462 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 COG2Q14746 738 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 TTBK2Q6IQ55 1244 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 FAM160B2Q86V87 743 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 RAB11FIP4Q86YS3 637 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 STAG2Q8N3U4 1231 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 ZNF274Q96GC6 653 aaPredicted RBP24.6■■□□□ 1.53
CACNB3-210ENST00000548874 PARK7Q99497 189 aaKnown RBP24.6■■□□□ 1.53
CACNB3-210ENST00000548874 P2RX7Q99572 595 aaKnown RBP24.6■■□□□ 1.53
CACNB3-210ENST00000548874 LARP6Q9BRS8 491 aaKnown RBP24.6■■□□□ 1.53
CACNB3-210ENST00000548874 GPCPD1Q9NPB8 672 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 PPP1R9AQ9ULJ8 1098 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 ADGRA2Q96PE1 1338 aa24.6■■□□□ 1.53
CACNB3-210ENST00000548874 SPDYE16A6NNV3 312 aaPredicted RBP24.59■■□□□ 1.53
CACNB3-210ENST00000548874 GOLGA8BA8MQT2 603 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 CYP2C8P10632 490 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 PDIA3P30101 505 aaKnown RBP24.59■■□□□ 1.53
CACNB3-210ENST00000548874 DSG3P32926 999 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 STAT2P52630 851 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 TAF1CQ15572 869 aaPredicted RBP24.59■■□□□ 1.53
CACNB3-210ENST00000548874 LBX2Q6XYB7 198 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 FANCBQ8NB91 859 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 CTCFLQ8NI51 663 aaPredicted RBP24.59■■□□□ 1.53
CACNB3-210ENST00000548874 CHURC1Q8WUH1 139 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 SLF1Q9BQI6 1058 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 CFHR5Q9BXR6 569 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 TPCN1Q9ULQ1 816 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 ADAMTS5Q9UNA0 930 aa24.59■■□□□ 1.53
CACNB3-210ENST00000548874 CA12O43570 354 aa24.58■■□□□ 1.53
CACNB3-210ENST00000548874 KIF5BP33176 963 aa24.58■■□□□ 1.53
CACNB3-210ENST00000548874 HERVK_113P62684 666 aa24.58■■□□□ 1.53
CACNB3-210ENST00000548874 MAP2K1Q02750 393 aaPredicted RBP24.58■■□□□ 1.53
CACNB3-210ENST00000548874 POTEEQ6S8J3 1075 aa24.58■■□□□ 1.53
CACNB3-210ENST00000548874 JMYQ8N9B5 988 aa24.58■■□□□ 1.53
CACNB3-210ENST00000548874 RNF186Q9NXI6 227 aa24.58■■□□□ 1.53
CACNB3-210ENST00000548874 HOXC10Q9NYD6 342 aa24.58■■□□□ 1.53
CACNB3-210ENST00000548874 ISY1Q9ULR0 285 aaKnown RBP24.58■■□□□ 1.53
CACNB3-210ENST00000548874 A0A0G2JMZ2 1700 aa24.58■■□□□ 1.52
CACNB3-210ENST00000548874 GOLGA8AA7E2F4 631 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms