RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PLXNB2O15031 1838 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 ZMYM6O95789 1325 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 A0A0G2JMZ2 1700 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 PARP14Q460N5 1801 aa18.68■□□□□ 0.58
DDX54-205ENST00000548786 KIAA0100Q14667 2235 aaKnown RBP18.68■□□□□ 0.58
DDX54-205ENST00000548786 CCL5P13501 91 aa18.68■□□□□ 0.58
DDX54-205ENST00000548786 RASGRP2Q7LDG7 609 aa18.68■□□□□ 0.58
DDX54-205ENST00000548786 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
DDX54-205ENST00000548786 MOV10L1Q9BXT6 1211 aaKnown RBP18.68■□□□□ 0.58
DDX54-205ENST00000548786 IL17RBQ9NRM6 502 aa18.68■□□□□ 0.58
DDX54-205ENST00000548786 NEDD4P46934 1319 aa18.68■□□□□ 0.58
DDX54-205ENST00000548786 ORC4O43929 436 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 NEFLP07196 543 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 CHMLP26374 656 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 UBXN2AP68543 259 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 IRF5Q13568 498 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 MFSD6Q6ZSS7 791 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 SPATC1LQ9H0A9 340 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 UNC93B1Q9H1C4 597 aa18.67■□□□□ 0.58
DDX54-205ENST00000548786 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
DDX54-205ENST00000548786 LAMA4Q16363 1823 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 ZNF213O14771 459 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 SLC4A3P48751 1232 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 TRIM32Q13049 653 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 AKNAD1Q5T1N1 836 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 SLFN13Q68D06 897 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 NCAPG2Q86XI2 1143 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 SLF1Q9BQI6 1058 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 RNF208Q9H0X6 261 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 PPP1R9AQ9ULJ8 1098 aa18.66■□□□□ 0.58
DDX54-205ENST00000548786 ERCC3P19447 782 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 CCL14Q16627 93 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 MB21D1Q8N884 522 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 PXYLP1Q8TE99 480 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 STAG1Q8WVM7 1258 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 TRIB2Q92519 343 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 MKL1Q969V6 931 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 IVNS1ABPQ9Y6Y0 642 aa18.65■□□□□ 0.58
DDX54-205ENST00000548786 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
DDX54-205ENST00000548786 VWA5AO00534 786 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 FGRP09769 529 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 MCCP23508 829 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 RGS2P41220 211 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 IKQ13123 557 aaPredicted RBP18.64■□□□□ 0.57
DDX54-205ENST00000548786 MORN1Q5T089 497 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 GMCL1P1Q8NEA9 526 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 RUFY2Q8WXA3 655 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 ZKSCAN3Q9BRR0 538 aa18.64■□□□□ 0.57
DDX54-205ENST00000548786 HMGCRP04035 888 aa18.63■□□□□ 0.57
DDX54-205ENST00000548786 BMP3P12645 472 aa18.63■□□□□ 0.57
DDX54-205ENST00000548786 PTPREP23469 700 aa18.63■□□□□ 0.57
DDX54-205ENST00000548786 PTH1RQ03431 593 aa18.63■□□□□ 0.57
DDX54-205ENST00000548786 IMMTQ16891 758 aaKnown RBP18.63■□□□□ 0.57
DDX54-205ENST00000548786 RNF41Q9H4P4 317 aaPredicted RBP18.63■□□□□ 0.57
DDX54-205ENST00000548786 RAD50Q92878 1312 aa18.63■□□□□ 0.57
DDX54-205ENST00000548786 TMEM232C9JQI7 657 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 ZKSCAN1P17029 563 aaPredicted RBP18.62■□□□□ 0.57
DDX54-205ENST00000548786 SLC1A4P43007 532 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 MAP2K5Q13163 448 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 CCDC96Q2M329 555 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 KCTD1Q719H9 257 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 CPXCR1Q8N123 301 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 USP6NLQ92738 828 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 APBA2Q99767 749 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
DDX54-205ENST00000548786 CTDP1Q9Y5B0 961 aaPredicted RBP18.62■□□□□ 0.57
DDX54-205ENST00000548786 MKI67P46013 3256 aaKnown RBP18.61■□□□□ 0.57
DDX54-205ENST00000548786 SLC15A5A6NIM6 579 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 B4E1Z4 1266 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 KDM4AO75164 1064 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 ADORA2AP29274 412 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 GRB14Q14449 540 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 PPP4R3BQ5MIZ7 849 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 REPS2Q8NFH8 660 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 ESR2Q92731 530 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 DEFB118Q96PH6 123 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 TMEM47Q9BQJ4 181 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 SYNPO2Q9UMS6 1093 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 ADAMTS5Q9UNA0 930 aa18.61■□□□□ 0.57
DDX54-205ENST00000548786 SGSM2O43147 1006 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 PRKAR2AP13861 404 aaKnown RBP18.6■□□□□ 0.57
DDX54-205ENST00000548786 STAT3P40763 770 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 SNAP25P60880 206 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 SNRNP48Q6IEG0 339 aaKnown RBP18.6■□□□□ 0.57
DDX54-205ENST00000548786 PRPF38AQ8NAV1 312 aaKnown RBP18.6■□□□□ 0.57
DDX54-205ENST00000548786 SHCBP1Q8NEM2 672 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 NPLOC4Q8TAT6 608 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 SHISA4Q96DD7 197 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 RAVER2Q9HCJ3 691 aaKnown RBP18.6■□□□□ 0.57
DDX54-205ENST00000548786 FLRT1Q9NZU1 646 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
DDX54-205ENST00000548786 ZNF214Q9UL59 606 aaPredicted RBP18.6■□□□□ 0.57
DDX54-205ENST00000548786 FRMPD2Q68DX3 1309 aaPredicted RBP18.59■□□□□ 0.57
DDX54-205ENST00000548786 ZBED4O75132 1171 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms