RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 CHD1LQ86WJ1 897 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 ABRAQ8N0Z2 381 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 STK11IPQ8N1F8 1099 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 MKL1Q969V6 931 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.55□□□□□ -0.24
BEST3-209ENST00000548658 LNPKQ9C0E8 428 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 ADAMTS5Q9UNA0 930 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
BEST3-209ENST00000548658 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 F5H6K3 240 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 TTLL1O95922 423 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 ERCC3P19447 782 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 COPB2P35606 906 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 NUCB1Q02818 461 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 KLRC3Q07444 240 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 MCMDC2Q4G0Z9 681 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 B4GALNT3Q6L9W6 998 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 EXOC6Q8TAG9 804 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
BEST3-209ENST00000548658 PLXNB2O15031 1838 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 IGKV6D-41A0A0C4DH26 115 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 MSCO60682 206 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 PRDM1O75626 825 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 FCER1AP12319 257 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
BEST3-209ENST00000548658 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
BEST3-209ENST00000548658 TRIM32Q13049 653 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 ALX1Q15699 326 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 NCAPG2Q86XI2 1143 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 PRPF38AQ8NAV1 312 aaKnown RBP13.53□□□□□ -0.24
BEST3-209ENST00000548658 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 ATG4CQ96DT6 458 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 OSBPL3Q9H4L5 887 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 OGDHLQ9ULD0 1010 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
BEST3-209ENST00000548658 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
BEST3-209ENST00000548658 VWA5AO00534 786 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 IGHDP01880 384 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 ADORA2AP29274 412 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 STAT3P40763 770 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 TFAP4Q01664 338 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 CCL14Q16627 93 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 OLFML2BQ68BL8 750 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 RIOX2Q8IUF8 465 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 GMCL1P1Q8NEA9 526 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 CEP95Q96GE4 821 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 PAWRQ96IZ0 340 aaKnown RBP13.52□□□□□ -0.25
BEST3-209ENST00000548658 SLF1Q9BQI6 1058 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 ANAPC4Q9UJX5 808 aa13.52□□□□□ -0.25
BEST3-209ENST00000548658 PLIN4Q96Q06 1357 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 TSPY2A6NKD2 308 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 EVI5O60447 810 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 NDUFB10O96000 172 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 FDX1P10109 184 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 KCTD2Q14681 263 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 TMEM132BQ14DG7 1078 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 FBXO28Q9NVF7 368 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 FEM1BQ9UK73 627 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 CTDP1Q9Y5B0 961 aaPredicted RBP13.51□□□□□ -0.25
BEST3-209ENST00000548658 RLFQ13129 1914 aa13.51□□□□□ -0.25
BEST3-209ENST00000548658 GREB1LQ9C091 1923 aaPredicted RBP13.51□□□□□ -0.25
BEST3-209ENST00000548658 H0YGN5 161 aa13.5□□□□□ -0.25
BEST3-209ENST00000548658 HIP1O00291 1037 aa13.5□□□□□ -0.25
BEST3-209ENST00000548658 ZBED4O75132 1171 aa13.5□□□□□ -0.25
BEST3-209ENST00000548658 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
BEST3-209ENST00000548658 CCDC129Q6ZRS4 1044 aa13.5□□□□□ -0.25
BEST3-209ENST00000548658 NPLOC4Q8TAT6 608 aa13.5□□□□□ -0.25
BEST3-209ENST00000548658 TEX13BQ9BXU2 312 aa13.5□□□□□ -0.25
BEST3-209ENST00000548658 ZMYM6O95789 1325 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 ATP2A1O14983 1001 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 SLC34A2O95436 690 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 FGAP02671 866 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 FGRP09769 529 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
BEST3-209ENST00000548658 NT5C2P49902 561 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 FAM47AQ5JRC9 791 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 CHURC1Q8WUH1 139 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 FAM227BQ96M60 508 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 MMP19Q99542 508 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 C11orf49Q9H6J7 331 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 ZNF214Q9UL59 606 aaPredicted RBP13.49□□□□□ -0.25
BEST3-209ENST00000548658 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 DIS3Q9Y2L1 958 aaKnown RBP13.49□□□□□ -0.25
BEST3-209ENST00000548658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
BEST3-209ENST00000548658 A0A0G2JMZ2 1700 aa13.49□□□□□ -0.25
BEST3-209ENST00000548658 CCDC171Q6TFL3 1326 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 A0A0D9SFI3 127 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 FOXP2O15409 715 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 ORC4O43929 436 aa13.48□□□□□ -0.25
BEST3-209ENST00000548658 RANBP6O60518 1105 aaKnown RBP13.48□□□□□ -0.25
BEST3-209ENST00000548658 COBLO75128 1261 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms