RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 VCPKMTQ9H867 229 aa10.3□□□□□ -0.76
SP1-203ENST00000548560 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
SP1-203ENST00000548560 ADGRA2Q96PE1 1338 aa10.3□□□□□ -0.76
SP1-203ENST00000548560 A0A0G2JMZ2 1700 aa10.3□□□□□ -0.76
SP1-203ENST00000548560 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 SGSM2O43147 1006 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 ORC4O43929 436 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 CDC45O75419 566 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 TTLL1O95922 423 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 HOXA7P31268 230 aaPredicted RBP10.29□□□□□ -0.76
SP1-203ENST00000548560 TFAP4Q01664 338 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 FAM47AQ5JRC9 791 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 AKNAD1Q5T1N1 836 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 C17orf99Q6UX52 265 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 NEDD1Q8NHV4 660 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 TANGO6Q9C0B7 1094 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 RPAP3Q9H6T3 665 aaPredicted RBP10.29□□□□□ -0.76
SP1-203ENST00000548560 NYAP2Q9P242 653 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.29□□□□□ -0.76
SP1-203ENST00000548560 TMX2Q9Y320 296 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 TRIM17Q9Y577 477 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 DOCK3Q8IZD9 2030 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 RLFQ13129 1914 aa10.29□□□□□ -0.76
SP1-203ENST00000548560 PLXNB2O15031 1838 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 A0A1W2PRG0 241 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 WDR46O15213 610 aaKnown RBP10.28□□□□□ -0.76
SP1-203ENST00000548560 NT5C2P49902 561 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 HERVK_113P62684 666 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 LACTBP83111 547 aaPredicted RBP10.28□□□□□ -0.76
SP1-203ENST00000548560 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
SP1-203ENST00000548560 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 SPICE1Q8N0Z3 855 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 ANKRD13CQ8N6S4 541 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 ESR2Q92731 530 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 IL25Q9H293 177 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 OCEL1Q9H607 264 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 EFCC1Q9HA90 598 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 MTMR4Q9NYA4 1195 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 CLIP2Q9UDT6 1046 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 ISY1Q9ULR0 285 aaKnown RBP10.28□□□□□ -0.76
SP1-203ENST00000548560 STX8Q9UNK0 236 aa10.28□□□□□ -0.76
SP1-203ENST00000548560 MYH6P13533 1939 aa10.27□□□□□ -0.76
SP1-203ENST00000548560 IGKV6D-41A0A0C4DH26 115 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 GRXCR2A6NFK2 248 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 FLOT1O75955 427 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 GNRH1P01148 92 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 FGRP09769 529 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 BCRP11274 1271 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 FCGRTP55899 365 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 TRDNQ13061 729 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 CATSPERGQ6ZRH7 1159 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 OTOP1Q7RTM1 612 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 IQCA1Q86XH1 822 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 CCAR1Q8IX12 1150 aaKnown RBP10.27□□□□□ -0.77
SP1-203ENST00000548560 LRRC47Q8N1G4 583 aaKnown RBP10.27□□□□□ -0.77
SP1-203ENST00000548560 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
SP1-203ENST00000548560 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 PAGR1Q9BTK6 254 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.27□□□□□ -0.77
SP1-203ENST00000548560 KDM4CQ9H3R0 1056 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 CNNM2Q9H8M5 875 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 CWC22Q9HCG8 908 aaKnown RBP10.27□□□□□ -0.77
SP1-203ENST00000548560 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 SYNPO2Q9UMS6 1093 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 HTTP42858 3142 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 NEDD4P46934 1319 aa10.27□□□□□ -0.77
SP1-203ENST00000548560 C2orf72A6NCS6 295 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 CCDC85CA6NKD9 419 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 TNPO2O14787 897 aaKnown RBP10.26□□□□□ -0.77
SP1-203ENST00000548560 TRIM66O15016 1216 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 FMNL1O95466 1100 aaPredicted RBP10.26□□□□□ -0.77
SP1-203ENST00000548560 HOXD10P28358 340 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 PSMC4P43686 418 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 PTH1RQ03431 593 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 PDE4DQ08499 809 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 IER5LQ5T953 404 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 RALYLQ86SE5 291 aaKnown RBP10.26□□□□□ -0.77
SP1-203ENST00000548560 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 P2RX7Q99572 595 aaKnown RBP10.26□□□□□ -0.77
SP1-203ENST00000548560 KRT23Q9C075 422 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
SP1-203ENST00000548560 ZNFX1Q9P2E3 1918 aaKnown RBP10.25□□□□□ -0.77
SP1-203ENST00000548560 RBBP6Q7Z6E9 1792 aaKnown RBP10.25□□□□□ -0.77
SP1-203ENST00000548560 B4E1Z4 1266 aa10.25□□□□□ -0.77
SP1-203ENST00000548560 F5H6K3 240 aa10.25□□□□□ -0.77
SP1-203ENST00000548560 SLC34A2O95436 690 aa10.25□□□□□ -0.77
SP1-203ENST00000548560 NDUFB10O96000 172 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms