RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 NFKBIEO00221 500 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 PDHBP11177 359 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 TEX2Q8IWB9 1127 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 ZFPM1Q8IX07 1006 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
PTCH1-215ENST00000547672 DAGLBQ8NCG7 672 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 CLSTN2Q9H4D0 955 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 SH2D4AQ9H788 454 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 MYOZ2Q9NPC6 264 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 GJB4Q9NTQ9 266 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 DACT1Q9NYF0 836 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 PCDHA4Q9UN74 947 aa15.42■□□□□ 0.06
PTCH1-215ENST00000547672 TCP10L2B9ZVM9 353 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 H7C1D1 291 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 FZD9O00144 591 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 CACNB3P54284 484 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 UVSSAQ2YD98 709 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 MCTP2Q6DN12 878 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 KRI1Q8N9T8 703 aaKnown RBP15.41■□□□□ 0.06
PTCH1-215ENST00000547672 FSIP1Q8NA03 581 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 FERMT2Q96AC1 680 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 ZBED3Q96IU2 234 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-215ENST00000547672 ARHGEF10LQ9HCE6 1279 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 FAM13BQ9NYF5 915 aa15.41■□□□□ 0.06
PTCH1-215ENST00000547672 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-215ENST00000547672 ESYT2A0FGR8 921 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 PSDA5PKW4 1024 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-215ENST00000547672 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 ZRSR1Q15695 479 aaKnown RBP15.4■□□□□ 0.06
PTCH1-215ENST00000547672 PPP1R18Q6NYC8 613 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 USP17L2Q6R6M4 530 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 SASS6Q6UVJ0 657 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 SH3BP5LQ7L8J4 393 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 GMCL1P1Q8NEA9 526 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 TIGD1Q96MW7 591 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 PYM1Q9BRP8 204 aaKnown RBP15.4■□□□□ 0.06
PTCH1-215ENST00000547672 VEZTQ9HBM0 779 aa15.4■□□□□ 0.06
PTCH1-215ENST00000547672 ARFGEF1Q9Y6D6 1849 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 PNMA6FA0A0J9YX94 578 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 CCDC194A0A1B0GVG4 234 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 USP17L5A8MUK1 530 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 EEF2P13639 858 aaKnown RBP15.39■□□□□ 0.05
PTCH1-215ENST00000547672 LIG1P18858 919 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 ICA1Q05084 483 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 ORC2Q13416 577 aaPredicted RBP15.39■□□□□ 0.05
PTCH1-215ENST00000547672 PTPAQ15257 358 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 KRT25Q7Z3Z0 450 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 HEATR3Q7Z4Q2 680 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 SDF4Q9BRK5 362 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
PTCH1-215ENST00000547672 CLRN2A0PK11 232 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 WNT10BO00744 389 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 LMNB1P20700 586 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 SLC1A4P43007 532 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 NAPAP54920 295 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 MAP3K10Q02779 954 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 CCDC96Q2M329 555 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 TPRNQ4KMQ1 711 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 SLFN13Q68D06 897 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 KANK3Q6NY19 840 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 ELOA2Q8IYF1 753 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-215ENST00000547672 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 ZMYND12Q9H0C1 365 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 CNOT7Q9UIV1 285 aaKnown RBP15.38■□□□□ 0.05
PTCH1-215ENST00000547672 PCDHAC2Q9Y5I4 1007 aa15.38■□□□□ 0.05
PTCH1-215ENST00000547672 SRPRBQ9Y5M8 271 aaKnown RBP15.38■□□□□ 0.05
PTCH1-215ENST00000547672 FAM237AA0A1B0GTK4 181 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 STXBP3O00186 592 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 LAD1O00515 517 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 NR1I2O75469 434 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 GOLGA8HP0CJ92 632 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 XRCC6P12956 609 aaKnown RBP eCLIP15.37■□□□□ 0.05
PTCH1-215ENST00000547672 PTPREP23469 700 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 MRPL12P52815 198 aaKnown RBP15.37■□□□□ 0.05
PTCH1-215ENST00000547672 NR5A1Q13285 461 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 TTC38Q5R3I4 469 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 RBM43Q6ZSC3 357 aaKnown RBP15.37■□□□□ 0.05
PTCH1-215ENST00000547672 ARHGAP27Q6ZUM4 889 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 GAS2L3Q86XJ1 694 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 LRRC47Q8N1G4 583 aaKnown RBP15.37■□□□□ 0.05
PTCH1-215ENST00000547672 ENGASEQ8NFI3 743 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
PTCH1-215ENST00000547672 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
PTCH1-215ENST00000547672 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
PTCH1-215ENST00000547672 hCG_1642624A0A1W2PR95 340 aa15.36■□□□□ 0.05
PTCH1-215ENST00000547672 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
PTCH1-215ENST00000547672 CYTH3O43739 400 aa15.36■□□□□ 0.05
PTCH1-215ENST00000547672 ASNSP08243 561 aa15.36■□□□□ 0.05
PTCH1-215ENST00000547672 SYKP43405 635 aa15.36■□□□□ 0.05
PTCH1-215ENST00000547672 GMPSP49915 693 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-215ENST00000547672 TOB1P50616 345 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-215ENST00000547672 SEPT2Q15019 361 aa15.36■□□□□ 0.05
PTCH1-215ENST00000547672 AXDND1Q5T1B0 1012 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-215ENST00000547672 ARL6IP4Q66PJ3 421 aaKnown RBP15.36■□□□□ 0.05
PTCH1-215ENST00000547672 WWC2Q6AWC2 1192 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms