RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	XAGE3	Q8WTP9	111 aa		7.29	□□□□□ -1.24
LGR5-204	ENST00000547310	ASB11	Q8WXH4	323 aa		7.29	□□□□□ -1.24
LGR5-204	ENST00000547310	BORCS6	Q96GS4	357 aa		7.29	□□□□□ -1.24
LGR5-204	ENST00000547310	TINF2	Q9BSI4	451 aa		7.29	□□□□□ -1.24
LGR5-204	ENST00000547310	STRIP2	Q9ULQ0	834 aa		7.29	□□□□□ -1.24
LGR5-204	ENST00000547310	TPX2	Q9ULW0	747 aa	Known RBP	7.29	□□□□□ -1.24
LGR5-204	ENST00000547310	SMG5	Q9UPR3	1016 aa	Known RBP	7.29	□□□□□ -1.24
LGR5-204	ENST00000547310	CNTNAP4	Q9C0A0	1308 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	TCAF2	A6NFQ2	919 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	NME1	P15531	152 aa	Known RBP	7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	ATF4	P18848	351 aa	Predicted RBP	7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	TNNI2	P48788	182 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	ZP2	Q05996	745 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	ARSH	Q5FYA8	562 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	CDH24	Q86UP0	819 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	VWCE	Q96DN2	955 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	FERD3L	Q96RJ6	166 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	TM9SF2	Q99805	663 aa		7.28	□□□□□ -1.24
LGR5-204	ENST00000547310	NUAK1	O60285	661 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	RAG1	P15918	1043 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	GIPR	P48546	466 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	NFKB2	Q00653	900 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	NKPD1	Q17RQ9	610 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	VPS37D	Q86XT2	251 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	SPACA3	Q8IXA5	215 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	PHACTR4	Q8IZ21	702 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	OR6P1	Q8NGX9	317 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	PIWIL2	Q8TC59	973 aa	Known RBP	7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	RNF141	Q8WVD5	230 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	GML	Q99445	158 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	NSUN3	Q9H649	340 aa	Known RBP	7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	PPT2	Q9UMR5	302 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	CAPN6	Q9Y6Q1	641 aa		7.27	□□□□□ -1.25
LGR5-204	ENST00000547310	GNAT3	A8MTJ3	354 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	UBOX5	O94941	541 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	CLCN7	P51798	805 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	LINC00310	P59036	64 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	KIF2C	Q99661	725 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	ASPN	Q9BXN1	380 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	ANTXR1	Q9H6X2	564 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	CAPN10	Q9HC96	672 aa		7.26	□□□□□ -1.25
LGR5-204	ENST00000547310	NASP	P49321	788 aa	Predicted RBP	7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	ZC3H6	P61129	1189 aa	Known RBP	7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	ARHGAP27	Q6ZUM4	889 aa		7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	LSR	Q86X29	649 aa	Predicted RBP	7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	MFSD4A	Q8N468	514 aa		7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	C19orf47	Q8N9M1	422 aa	Known RBP	7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	CXorf38	Q8TB03	319 aa		7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	SHD	Q96IW2	340 aa		7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	DIRC2	Q96SL1	478 aa		7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	SRRT	Q9BXP5	876 aa	Known RBP	7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	ZCCHC4	Q9H5U6	513 aa		7.25	□□□□□ -1.25
LGR5-204	ENST00000547310	PRR33	A8MZF0	331 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	ETV2	O00321	342 aa	Predicted RBP	7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	GBP1	P32455	592 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	EIF6	P56537	245 aa	Known RBP	7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	NFIX	Q14938	502 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310		Q96M66	194 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	KREMEN1	Q96MU8	473 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	C8orf37	Q96NL8	207 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	SLC9A7	Q96T83	725 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	ST14	Q9Y5Y6	855 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	PITPNM2	Q9BZ72	1349 aa		7.24	□□□□□ -1.25
LGR5-204	ENST00000547310	ACR	P10323	421 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	SRF	P11831	508 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	GUCY2C	P25092	1073 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	RNF4	P78317	190 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	IKZF1	Q13422	519 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	THAP5	Q7Z6K1	395 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	KCNC2	Q96PR1	638 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	CRBN	Q96SW2	442 aa		7.23	□□□□□ -1.25
LGR5-204	ENST00000547310	ITIH2	P19823	946 aa		7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	ARID5A	Q03989	594 aa		7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	TNK2	Q07912	1038 aa		7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	DHRS1	Q96LJ7	313 aa		7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	SEMA3G	Q9NS98	782 aa		7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	RTEL1	Q9NZ71	1219 aa		7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	KCNH3	Q9ULD8	1083 aa		7.22	□□□□□ -1.25
LGR5-204	ENST00000547310	FAM155A	B1AL88	458 aa	Predicted RBP	7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	CBX7	O95931	251 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	FGR	P09769	529 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	BMP7	P18075	431 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	POLR2B	P30876	1174 aa	Known RBP	7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	GDNF	P39905	211 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	CASP7	P55210	303 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	FBXW10	Q5XX13	1052 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	CCDC81	Q6ZN84	652 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	TMEM192	Q8IY95	271 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	DTWD2	Q8NBA8	298 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	GPR62	Q9BZJ7	368 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	IRF2BPL	Q9H1B7	796 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	EPB41L4B	Q9H329	900 aa		7.21	□□□□□ -1.26
LGR5-204	ENST00000547310	CLEC3A	O75596	197 aa		7.2	□□□□□ -1.26
LGR5-204	ENST00000547310	ADRB1	P08588	477 aa		7.2	□□□□□ -1.26

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