RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
COL2A1-209ENST00000546974 MSCO60682 206 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 SLC25A27O95847 323 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 APPP05067 770 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 MX1P20591 662 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 TMEM132BQ14DG7 1078 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 NCAPG2Q86XI2 1143 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 ZNF444Q8N0Y2 327 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-209ENST00000546974 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 SLC5A4Q9NY91 659 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 SALL3Q9BXA9 1300 aa17.18■□□□□ 0.34
COL2A1-209ENST00000546974 COL6A1P12109 1028 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 CYP2C19P33261 490 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 ZMYM1Q5SVZ6 1142 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-209ENST00000546974 STK11IPQ8N1F8 1099 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 SEC62Q99442 399 aaKnown RBP17.17■□□□□ 0.34
COL2A1-209ENST00000546974 NACAP1Q9BZK3 213 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 FBXO28Q9NVF7 368 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-209ENST00000546974 DDX20Q9UHI6 824 aaKnown RBP17.17■□□□□ 0.34
COL2A1-209ENST00000546974 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 LAMA3Q16787 3333 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 PFASO15067 1338 aa17.17■□□□□ 0.34
COL2A1-209ENST00000546974 IGKV6D-41A0A0C4DH26 115 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 A0A1W2PPC1 479 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 VWA5AO00534 786 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 COBLO75128 1261 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 CYBAP13498 195 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 C7orf61Q8IZ16 206 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 TRPV1Q8NER1 839 aa17.16■□□□□ 0.34
COL2A1-209ENST00000546974 F5H6K3 240 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 RAD21O60216 631 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 FCER1AP12319 257 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 CNGA1P29973 690 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 KLRC3Q07444 240 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-209ENST00000546974 REPS2Q8NFH8 660 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 MKL1Q969V6 931 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 CLIP2Q9UDT6 1046 aa17.15■□□□□ 0.34
COL2A1-209ENST00000546974 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 COPB2P35606 906 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 STAT3P40763 770 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 PDE4BQ07343 736 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 MMP19Q99542 508 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 NAPBQ9H115 298 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 ZNF214Q9UL59 606 aaPredicted RBP17.14■□□□□ 0.33
COL2A1-209ENST00000546974 SYNPO2Q9UMS6 1093 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 SMCHD1A6NHR9 2005 aa17.14■□□□□ 0.33
COL2A1-209ENST00000546974 PRDM1O75626 825 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 NDUFB10O96000 172 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
COL2A1-209ENST00000546974 BMP8BP34820 402 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 AAMPQ13685 434 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 CEP95Q96GE4 821 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 MAML3Q96JK9 1138 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 GDF15Q99988 308 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 SLF1Q9BQI6 1058 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 MTMR4Q9NYA4 1195 aa17.13■□□□□ 0.33
COL2A1-209ENST00000546974 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
COL2A1-209ENST00000546974 DNM1LO00429 736 aa17.12■□□□□ 0.33
COL2A1-209ENST00000546974 SEPT4O43236 478 aa17.12■□□□□ 0.33
COL2A1-209ENST00000546974 TTLL1O95922 423 aa17.12■□□□□ 0.33
COL2A1-209ENST00000546974 PPARAQ07869 468 aa17.12■□□□□ 0.33
COL2A1-209ENST00000546974 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
COL2A1-209ENST00000546974 NEDD1Q8NHV4 660 aa17.12■□□□□ 0.33
COL2A1-209ENST00000546974 EVI5LQ96CN4 794 aa17.12■□□□□ 0.33
COL2A1-209ENST00000546974 NUP88Q99567 741 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-209ENST00000546974 DIS3Q9Y2L1 958 aaKnown RBP17.12■□□□□ 0.33
COL2A1-209ENST00000546974 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
COL2A1-209ENST00000546974 TSPY3P0CV98 308 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 TSPY8P0CW00 308 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 PDE1AP54750 535 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 KCTD2Q14681 263 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 LRRC26Q2I0M4 334 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 TICAM2Q86XR7 235 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 ARRDC4Q8NCT1 418 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 TEX13BQ9BXU2 312 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 SENP6Q9GZR1 1112 aaPredicted RBP17.11■□□□□ 0.33
COL2A1-209ENST00000546974 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
COL2A1-209ENST00000546974 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
COL2A1-209ENST00000546974 SYN1P17600 705 aa17.1■□□□□ 0.33
COL2A1-209ENST00000546974 ZNF792Q3KQV3 632 aa17.1■□□□□ 0.33
COL2A1-209ENST00000546974 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
COL2A1-209ENST00000546974 CCDC129Q6ZRS4 1044 aa17.1■□□□□ 0.33
COL2A1-209ENST00000546974 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
COL2A1-209ENST00000546974 FEM1BQ9UK73 627 aa17.1■□□□□ 0.33
COL2A1-209ENST00000546974 FOXP2O15409 715 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 ZBED4O75132 1171 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 PGK2P07205 417 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 TFAP4Q01664 338 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 PPP4R3BQ5MIZ7 849 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 SNRNP48Q6IEG0 339 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms