RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 GTF2F1P35269 517 aaKnown RBP eCLIP7.45□□□□□ -1.22
IFIT1-202ENST00000546318 DDR1Q08345 913 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 IQUBQ8NA54 791 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 SPZ1Q9BXG8 430 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 FAM205CA6NFA0 338 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 TUBB4AP04350 444 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 PRR29P0C7W0 189 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 MYH1P12882 1939 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 TNNT1P13805 278 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 SMARCA1P28370 1054 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 KCNJ6P48051 423 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 SARSP49591 514 aaKnown RBP7.45□□□□□ -1.22
IFIT1-202ENST00000546318 PTGDRQ13258 359 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 SOGA3Q5TF21 947 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 SHISA4Q96DD7 197 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 C16orf45Q96MC5 204 aaPredicted RBP7.45□□□□□ -1.22
IFIT1-202ENST00000546318 PLIN4Q96Q06 1357 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 GSDMAQ96QA5 445 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 ATP6V0A2Q9Y487 856 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 C10orf71Q711Q0 1435 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 SYNRGQ9UMZ2 1314 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 CCZ1BP86790 482 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 CCZ1P86791 482 aaPredicted RBP7.45□□□□□ -1.22
IFIT1-202ENST00000546318 GRIN1Q05586 938 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 HSP90AA2PQ14568 343 aaPredicted RBP7.45□□□□□ -1.22
IFIT1-202ENST00000546318 NEDD1Q8NHV4 660 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
IFIT1-202ENST00000546318 TMEM47Q9BQJ4 181 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 BARHL2Q9NY43 387 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 POLLQ9UGP5 575 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 SWAP70Q9UH65 585 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 EVX2Q03828 476 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 NPY5RQ15761 445 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 TXNRD1Q16881 649 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.22
IFIT1-202ENST00000546318 PAGE5Q96GU1 130 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 C6orf50Q9HD87 102 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 PARP3Q9Y6F1 533 aa7.45□□□□□ -1.22
IFIT1-202ENST00000546318 GNA11P29992 359 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 PTPN14Q15678 1187 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 CEP135Q66GS9 1140 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 WWC2Q6AWC2 1192 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 VSTM4Q8IW00 320 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 RASSF8Q8NHQ8 419 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 CTAGE1Q96RT6 745 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 MYO3BQ8WXR4 1341 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 AFMP43652 599 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 NAPAP54920 295 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 ORC2Q13416 577 aaPredicted RBP7.44□□□□□ -1.22
IFIT1-202ENST00000546318 GRIK5Q16478 980 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 EARS2Q5JPH6 523 aaKnown RBP7.44□□□□□ -1.22
IFIT1-202ENST00000546318 ANKRD31Q8N7Z5 1873 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 PALM3A6NDB9 673 aaPredicted RBP7.44□□□□□ -1.22
IFIT1-202ENST00000546318 FOXN1O15353 648 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 HLA-DOAP06340 250 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 GTF2IP78347 998 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 DPYDQ12882 1025 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 DPP8Q6V1X1 898 aaPredicted RBP7.44□□□□□ -1.22
IFIT1-202ENST00000546318 STAG2Q8N3U4 1231 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 SPATA20Q8TB22 786 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 EPSTI1Q96J88 318 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 ZC3H12CQ9C0D7 883 aaKnown RBP7.44□□□□□ -1.22
IFIT1-202ENST00000546318 DAGLAQ9Y4D2 1042 aa7.44□□□□□ -1.22
IFIT1-202ENST00000546318 KLRF2D3W0D1 207 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 STXBP3O00186 592 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 GTPBP6O43824 516 aaPredicted RBP7.43□□□□□ -1.22
IFIT1-202ENST00000546318 STAT6P42226 847 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 ASPRV1Q53RT3 343 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 SLC44A5Q8NCS7 719 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 ANKRD20A12PQ8NF67 263 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 MAGEF1Q9HAY2 307 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 FANCLQ9NW38 375 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 PCDHA6Q9UN73 950 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 MTMR7Q9Y216 660 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 NFE2L3Q9Y4A8 694 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 PCDHA8Q9Y5H6 950 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 PSDA5PKW4 1024 aaPredicted RBP7.43□□□□□ -1.22
IFIT1-202ENST00000546318 MYL1P05976 194 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 FILIP1LQ4L180 1135 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 CCDC47Q96A33 483 aaKnown RBP7.43□□□□□ -1.22
IFIT1-202ENST00000546318 RIMBP2O15034 1052 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 RHBDL3P58872 404 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 PICALMQ13492 652 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 DTHD1Q6ZMT9 781 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 FCHSD1Q86WN1 690 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 GRAMD1CQ8IYS0 662 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 CCAR2Q8N163 923 aaKnown RBP7.43□□□□□ -1.22
IFIT1-202ENST00000546318 MASTLQ96GX5 879 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 GTPBP4Q9BZE4 634 aaKnown RBP7.43□□□□□ -1.22
IFIT1-202ENST00000546318 MYH8P13535 1937 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 ATP1A3P13637 1013 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 PRPHP41219 470 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 SEMA3FQ13275 785 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 PPP1R18Q6NYC8 613 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 RGPD3A6NKT7 1758 aaPredicted RBP7.43□□□□□ -1.22
IFIT1-202ENST00000546318 RGPD4Q7Z3J3 1758 aa7.43□□□□□ -1.22
IFIT1-202ENST00000546318 COL11A2P13942 1736 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms