RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 LZTFL1Q9NQ48 299 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 GOLGA6CA6NDK9 693 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 SH2B2O14492 632 aaPredicted RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 GOLGA6DP0CG33 693 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 MARCKSP29966 332 aaPredicted RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 RAB27AP51159 221 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 NTRK3Q16288 839 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 POTEAQ6S8J7 498 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 KIAA1328Q86T90 577 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 AMOTL1Q8IY63 956 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 TBC1D31Q96DN5 1066 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 ZCWPW1Q9H0M4 648 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 GBP3Q9H0R5 595 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 SUDS3Q9H7L9 328 aaPredicted RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 GOLGA6AQ9NYA3 693 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 MYO6Q9UM54 1294 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 IKBKBO14920 756 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 RANBP6O60518 1105 aaKnown RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 RXRAP19793 462 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 VPS72Q15906 364 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 VPS37DQ86XT2 251 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 ZBTB38Q8NAP3 1195 aaPredicted RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 DPF2Q92785 391 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 CCDC97Q96F63 343 aaPredicted RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 PRDM11Q9NQV5 511 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 FAM217BQ9NTX9 383 aaPredicted RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 ANGEL1Q9UNK9 670 aaKnown RBP8.84□□□□□ -0.99
UBR1-202ENST00000546274 TACC3Q9Y6A5 838 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 MYH6P13533 1939 aa8.84□□□□□ -0.99
UBR1-202ENST00000546274 TCRBV5S4A2TA0A5A2 114 aa8.83□□□□□ -1
UBR1-202ENST00000546274 CPLX1O14810 134 aa8.83□□□□□ -1
UBR1-202ENST00000546274 MEFVO15553 781 aaPredicted RBP8.83□□□□□ -1
UBR1-202ENST00000546274 ZEB2O60315 1214 aa8.83□□□□□ -1
UBR1-202ENST00000546274 GGCXP38435 758 aa8.83□□□□□ -1
UBR1-202ENST00000546274 USP5P45974 858 aa8.83□□□□□ -1
UBR1-202ENST00000546274 ICA1Q05084 483 aa8.83□□□□□ -1
UBR1-202ENST00000546274 PDCD2Q16342 344 aaPredicted RBP8.83□□□□□ -1
UBR1-202ENST00000546274 KRT40Q6A162 431 aa8.83□□□□□ -1
UBR1-202ENST00000546274 APOA5Q6Q788 366 aa8.83□□□□□ -1
UBR1-202ENST00000546274 SYNE3Q6ZMZ3 975 aa8.83□□□□□ -1
UBR1-202ENST00000546274 RALYLQ86SE5 291 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 RSRC1Q96IZ7 334 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 ZNF512BQ96KM6 892 aaPredicted RBP8.83□□□□□ -1
UBR1-202ENST00000546274 HINFPQ9BQA5 517 aa8.83□□□□□ -1
UBR1-202ENST00000546274 CHCHD3Q9NX63 227 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 LMCD1Q9NZU5 365 aa8.83□□□□□ -1
UBR1-202ENST00000546274 ZNF232Q9UNY5 417 aa8.83□□□□□ -1
UBR1-202ENST00000546274 POTEB2H3BUK9 544 aa8.83□□□□□ -1
UBR1-202ENST00000546274 PPP6R2O75170 966 aa8.83□□□□□ -1
UBR1-202ENST00000546274 PRPF6O94906 941 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 FAM163BP0C2L3 166 aa8.83□□□□□ -1
UBR1-202ENST00000546274 FANCCQ00597 558 aa8.83□□□□□ -1
UBR1-202ENST00000546274 PPARDQ03181 441 aa8.83□□□□□ -1
UBR1-202ENST00000546274 KIF4BQ2VIQ3 1234 aa8.83□□□□□ -1
UBR1-202ENST00000546274 CFAP100Q494V2 611 aa8.83□□□□□ -1
UBR1-202ENST00000546274 HHATQ5VTY9 493 aa8.83□□□□□ -1
UBR1-202ENST00000546274 RESP18Q5W5W9 173 aa8.83□□□□□ -1
UBR1-202ENST00000546274 TOGARAM2Q6ZUX3 1019 aa8.83□□□□□ -1
UBR1-202ENST00000546274 FOXP4Q8IVH2 680 aaPredicted RBP8.83□□□□□ -1
UBR1-202ENST00000546274 IGDCC4Q8TDY8 1250 aa8.83□□□□□ -1
UBR1-202ENST00000546274 PHKBQ93100 1093 aa8.83□□□□□ -1
UBR1-202ENST00000546274 ALG1Q9BT22 464 aa8.83□□□□□ -1
UBR1-202ENST00000546274 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
UBR1-202ENST00000546274 SLC40A1Q9NP59 571 aa8.83□□□□□ -1
UBR1-202ENST00000546274 RAB21Q9UL25 225 aa8.83□□□□□ -1
UBR1-202ENST00000546274 EIF4E1BA6NMX2 242 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 FSBPO95073 299 aa8.83□□□□□ -1
UBR1-202ENST00000546274 SERPINC1P01008 464 aa8.83□□□□□ -1
UBR1-202ENST00000546274 BMP6P22004 513 aa8.83□□□□□ -1
UBR1-202ENST00000546274 IFIT5Q13325 482 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 PNOCQ13519 176 aa8.83□□□□□ -1
UBR1-202ENST00000546274 HSP90AA4PQ58FG1 418 aa8.83□□□□□ -1
UBR1-202ENST00000546274 CAPRIN2Q6IMN6 1127 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 TOM1L2Q6ZVM7 507 aa8.83□□□□□ -1
UBR1-202ENST00000546274 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
UBR1-202ENST00000546274 DRAXINQ8NBI3 349 aaPredicted RBP8.83□□□□□ -1
UBR1-202ENST00000546274 TTLL11Q8NHH1 800 aa8.83□□□□□ -1
UBR1-202ENST00000546274 KIFC2Q96AC6 838 aa8.83□□□□□ -1
UBR1-202ENST00000546274 CCDC114Q96M63 670 aa8.83□□□□□ -1
UBR1-202ENST00000546274 GREM2Q9H772 168 aa8.83□□□□□ -1
UBR1-202ENST00000546274 INCENPQ9NQS7 918 aa8.83□□□□□ -1
UBR1-202ENST00000546274 UBN2Q6ZU65 1347 aa8.83□□□□□ -1
UBR1-202ENST00000546274 ZMYND10O75800 440 aa8.82□□□□□ -1
UBR1-202ENST00000546274 ABCD1P33897 745 aa8.82□□□□□ -1
UBR1-202ENST00000546274 SYKP43405 635 aa8.82□□□□□ -1
UBR1-202ENST00000546274 METAP2P50579 478 aaKnown RBP eCLIP8.82□□□□□ -1
UBR1-202ENST00000546274 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
UBR1-202ENST00000546274 HLFQ16534 295 aa8.82□□□□□ -1
UBR1-202ENST00000546274 ACCSLQ4AC99 568 aa8.82□□□□□ -1
UBR1-202ENST00000546274 SLC9C2Q5TAH2 1124 aa8.82□□□□□ -1
UBR1-202ENST00000546274 B4GALNT4Q76KP1 1039 aa8.82□□□□□ -1
UBR1-202ENST00000546274 LY9Q9HBG7 655 aa8.82□□□□□ -1
UBR1-202ENST00000546274 EIF3HO15372 352 aaKnown RBP eCLIP8.82□□□□□ -1
UBR1-202ENST00000546274 ATP2C2O75185 946 aa8.82□□□□□ -1
UBR1-202ENST00000546274 UPP2O95045 317 aa8.82□□□□□ -1
UBR1-202ENST00000546274 PYGBP11216 843 aa8.82□□□□□ -1
UBR1-202ENST00000546274 ITGA6P23229 1130 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms