RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 USH1GQ495M9 461 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 CCDC40Q4G0X9 1142 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 CCDC122Q5T0U0 273 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 FOXP4Q8IVH2 680 aaPredicted RBP11.01□□□□□ -0.65
TRAF1-203ENST00000546084 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 TXLNBQ8N3L3 684 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 GOLGA1Q92805 767 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 COA7Q96BR5 231 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 PHLPP2Q6ZVD8 1323 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 LMTK3Q96Q04 1460 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 GNAT2P19087 354 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 CUL4BQ13620 913 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 PARD6BQ9BYG5 372 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 CXCR5P32302 372 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 CSGALNACT2Q8N6G5 542 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 CNBD1Q8NA66 436 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
TRAF1-203ENST00000546084 CWC15Q9P013 229 aaKnown RBP11.01□□□□□ -0.65
TRAF1-203ENST00000546084 A0A0U1RQJ8 604 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 GOLGA6L9A6NEM1 432 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 CHMP2AO43633 222 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 TADA3O75528 432 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
TRAF1-203ENST00000546084 CALM1P0DP23 149 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 CALM2P0DP24 149 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 CALM3P0DP25 149 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 CYP2C19P33261 490 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 MFSD14BQ5SR56 506 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 ATRIPQ8WXE1 791 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 RUFY1Q96T51 708 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 ZBTB21Q9ULJ3 1066 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
TRAF1-203ENST00000546084 IFNAR1P17181 557 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 USP8P40818 1118 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 SPA17Q15506 151 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 ZFYVE27Q5T4F4 411 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 CCDC43Q96MW1 224 aaKnown RBP11□□□□□ -0.65
TRAF1-203ENST00000546084 BPIFA3Q9BQP9 254 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 SRGAP2O75044 1071 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
TRAF1-203ENST00000546084 ZSCAN26Q16670 478 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 TMED8Q6PL24 325 aaPredicted RBP11□□□□□ -0.65
TRAF1-203ENST00000546084 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
TRAF1-203ENST00000546084 TCEAL9Q9UHQ7 104 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 LUC7L2Q9Y383 392 aaKnown RBP11□□□□□ -0.65
TRAF1-203ENST00000546084 PARP3Q9Y6F1 533 aa11□□□□□ -0.65
TRAF1-203ENST00000546084 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 CHMP4BP1P59074 171 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 PRPF4BQ13523 1007 aaKnown RBP10.99□□□□□ -0.65
TRAF1-203ENST00000546084 FAM196AQ6ZSG2 479 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 SPICE1Q8N0Z3 855 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 MARCH10Q8NA82 808 aaPredicted RBP10.99□□□□□ -0.65
TRAF1-203ENST00000546084 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 PSMA7O14818 248 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 SCG2P13521 617 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 SP4Q02446 784 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 CCDC93Q567U6 631 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 RBM26Q5T8P6 1007 aaKnown RBP10.99□□□□□ -0.65
TRAF1-203ENST00000546084 TTC19Q6DKK2 380 aaPredicted RBP10.99□□□□□ -0.65
TRAF1-203ENST00000546084 KANK3Q6NY19 840 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 CC2D1AQ6P1N0 951 aaPredicted RBP10.99□□□□□ -0.65
TRAF1-203ENST00000546084 KIAA0825Q8IV33 1275 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 MLKLQ8NB16 471 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 RGS22Q8NE09 1264 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 TMEM51Q9NW97 253 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 RGPD1P0DJD0 1748 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 SALL1Q9NSC2 1324 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 CTAGE9A4FU28 777 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 SMCO2A6NFE2 343 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 B4DLN1 442 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 ERLIN1O75477 346 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 CAPN2P17655 700 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 UBXN2AP68543 259 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 PAK1Q13153 545 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 TYW1BQ6NUM6 668 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 TRIM65Q6PJ69 517 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 KSR1Q8IVT5 923 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 REXO1L1PQ8IX06 675 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 SH3RF3Q8TEJ3 882 aaPredicted RBP10.99□□□□□ -0.65
TRAF1-203ENST00000546084 CALML4Q96GE6 196 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 TRIM10Q9UDY6 481 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 CACNA1FO60840 1977 aa10.99□□□□□ -0.65
TRAF1-203ENST00000546084 PARP10Q53GL7 1025 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 TRAPPC3LQ5T215 181 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 NCAPH2Q6IBW4 605 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 CCDC70Q6NSX1 233 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 SLC35F6Q8N357 371 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 AGXT2Q9BYV1 514 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 NBPF3Q9H094 633 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-203ENST00000546084 AGLP35573 1532 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 CPDO75976 1380 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 CTAGE15A4D2H0 777 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 TMCO5BA8MYB1 307 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 CTAGE8P0CG41 777 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 NFIXQ14938 502 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 CTAGE6Q86UF2 777 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms