RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.42■■■□□ 2.14
PDCD2-214ENST00000545869 SPATC1LQ9H0A9 340 aa28.42■■■□□ 2.14
PDCD2-214ENST00000545869 SDSP20132 328 aa28.41■■■□□ 2.14
PDCD2-214ENST00000545869 RTP1P59025 263 aa28.41■■■□□ 2.14
PDCD2-214ENST00000545869 COG2Q14746 738 aa28.41■■■□□ 2.14
PDCD2-214ENST00000545869 LRRFIP1Q32MZ4 808 aaKnown RBP28.41■■■□□ 2.14
PDCD2-214ENST00000545869 GJC2Q5T442 439 aaPredicted RBP28.41■■■□□ 2.14
PDCD2-214ENST00000545869 ZSCAN25Q6NSZ9 544 aa28.41■■■□□ 2.14
PDCD2-214ENST00000545869 RILPL2Q969X0 211 aa28.41■■■□□ 2.14
PDCD2-214ENST00000545869 TANGO6Q9C0B7 1094 aa28.41■■■□□ 2.14
PDCD2-214ENST00000545869 MSCO60682 206 aa28.4■■■□□ 2.14
PDCD2-214ENST00000545869 ERCC3P19447 782 aa28.4■■■□□ 2.14
PDCD2-214ENST00000545869 GUCD1Q96NT3 240 aa28.4■■■□□ 2.14
PDCD2-214ENST00000545869 COL11A1P12107 1806 aaPredicted RBP28.39■■■□□ 2.14
PDCD2-214ENST00000545869 PRKAB2O43741 272 aa28.39■■■□□ 2.14
PDCD2-214ENST00000545869 AKR1B1P15121 316 aa28.39■■■□□ 2.14
PDCD2-214ENST00000545869 OLFML2BQ68BL8 750 aa28.39■■■□□ 2.14
PDCD2-214ENST00000545869 ARMT1Q9H993 441 aa28.39■■■□□ 2.14
PDCD2-214ENST00000545869 ZNFX1Q9P2E3 1918 aaKnown RBP28.38■■■□□ 2.13
PDCD2-214ENST00000545869 CHGBP05060 677 aa28.38■■■□□ 2.13
PDCD2-214ENST00000545869 ZFYP08048 801 aaPredicted RBP28.38■■■□□ 2.13
PDCD2-214ENST00000545869 ADD2P35612 726 aa28.38■■■□□ 2.13
PDCD2-214ENST00000545869 DPP9Q86TI2 863 aa28.38■■■□□ 2.13
PDCD2-214ENST00000545869 SHCBP1Q8NEM2 672 aa28.38■■■□□ 2.13
PDCD2-214ENST00000545869 ATG4CQ96DT6 458 aa28.38■■■□□ 2.13
PDCD2-214ENST00000545869 SMCHD1A6NHR9 2005 aa28.37■■■□□ 2.13
PDCD2-214ENST00000545869 POTEB2H3BUK9 544 aa28.37■■■□□ 2.13
PDCD2-214ENST00000545869 DSG3P32926 999 aa28.37■■■□□ 2.13
PDCD2-214ENST00000545869 PRAMEF19Q5SWL8 479 aa28.37■■■□□ 2.13
PDCD2-214ENST00000545869 TMEM179Q6ZVK1 233 aa28.37■■■□□ 2.13
PDCD2-214ENST00000545869 SPICE1Q8N0Z3 855 aa28.37■■■□□ 2.13
PDCD2-214ENST00000545869 HOXC10Q9NYD6 342 aa28.37■■■□□ 2.13
PDCD2-214ENST00000545869 CYP2D7A0A087X1C5 515 aa28.36■■■□□ 2.13
PDCD2-214ENST00000545869 UBE3CQ15386 1083 aa28.36■■■□□ 2.13
PDCD2-214ENST00000545869 ATP11BQ9Y2G3 1177 aa28.36■■■□□ 2.13
PDCD2-214ENST00000545869 RNF113AO15541 343 aaKnown RBP28.35■■■□□ 2.13
PDCD2-214ENST00000545869 LBHD1Q9BQE6 289 aaPredicted RBP28.35■■■□□ 2.13
PDCD2-214ENST00000545869 STRNO43815 780 aa28.34■■■□□ 2.13
PDCD2-214ENST00000545869 MBD4O95243 580 aa28.34■■■□□ 2.13
PDCD2-214ENST00000545869 SLC39A5Q6ZMH5 540 aa28.34■■■□□ 2.13
PDCD2-214ENST00000545869 FAM161BQ96MY7 647 aa28.34■■■□□ 2.13
PDCD2-214ENST00000545869 TMX2Q9Y320 296 aa28.34■■■□□ 2.13
PDCD2-214ENST00000545869 MYH7P12883 1935 aa28.33■■■□□ 2.13
PDCD2-214ENST00000545869 SEPT4O43236 478 aa28.33■■■□□ 2.13
PDCD2-214ENST00000545869 FLOT1O75955 427 aa28.33■■■□□ 2.13
PDCD2-214ENST00000545869 PLS1Q14651 629 aa28.33■■■□□ 2.13
PDCD2-214ENST00000545869 VCPKMTQ9H867 229 aa28.33■■■□□ 2.13
PDCD2-214ENST00000545869 SWAP70Q9UH65 585 aa28.33■■■□□ 2.13
PDCD2-214ENST00000545869 HIP1O00291 1037 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 ICA1Q05084 483 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 SNX17Q15036 470 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 TRIM60Q495X7 471 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 FAM47AQ5JRC9 791 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 C9orf50Q5SZB4 431 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 FAM109BQ6ICB4 259 aaPredicted RBP28.32■■■□□ 2.12
PDCD2-214ENST00000545869 NCAPG2Q86XI2 1143 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 MB21D1Q8N884 522 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 MAML3Q96JK9 1138 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 PLXNA1Q9UIW2 1896 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 EYSQ5T1H1 3165 aa28.32■■■□□ 2.12
PDCD2-214ENST00000545869 TMEM132BQ14DG7 1078 aa28.31■■■□□ 2.12
PDCD2-214ENST00000545869 SAMD1Q6SPF0 538 aaPredicted RBP28.31■■■□□ 2.12
PDCD2-214ENST00000545869 ARRDC4Q8NCT1 418 aa28.31■■■□□ 2.12
PDCD2-214ENST00000545869 APPBP2Q92624 585 aa28.31■■■□□ 2.12
PDCD2-214ENST00000545869 MROH8Q9H579 483 aa28.31■■■□□ 2.12
PDCD2-214ENST00000545869 FBXO28Q9NVF7 368 aa28.31■■■□□ 2.12
PDCD2-214ENST00000545869 MYCNP04198 464 aaPredicted RBP28.3■■■□□ 2.12
PDCD2-214ENST00000545869 LRRC41Q15345 812 aa28.3■■■□□ 2.12
PDCD2-214ENST00000545869 SHHQ15465 462 aa28.3■■■□□ 2.12
PDCD2-214ENST00000545869 ZMYM1Q5SVZ6 1142 aa28.3■■■□□ 2.12
PDCD2-214ENST00000545869 SH3RF1Q7Z6J0 888 aa28.3■■■□□ 2.12
PDCD2-214ENST00000545869 PDLIM7Q9NR12 457 aa28.3■■■□□ 2.12
PDCD2-214ENST00000545869 CDH23Q9H251 3354 aa28.3■■■□□ 2.12
PDCD2-214ENST00000545869 KBTBD13C9JR72 458 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 ADCYAP1R1P41586 468 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 CDK8P49336 464 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 C12orf60Q5U649 245 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 ABRAQ8N0Z2 381 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 FERMT2Q96AC1 680 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 ARHGEF10LQ9HCE6 1279 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 PRDM5Q9NQX1 630 aaPredicted RBP28.29■■■□□ 2.12
PDCD2-214ENST00000545869 DIAPH3Q9NSV4 1193 aa28.29■■■□□ 2.12
PDCD2-214ENST00000545869 GREB1LQ9C091 1923 aaPredicted RBP28.29■■■□□ 2.12
PDCD2-214ENST00000545869 BADQ92934 168 aa28.28■■■□□ 2.12
PDCD2-214ENST00000545869 PRKAG2Q9UGJ0 569 aa28.28■■■□□ 2.12
PDCD2-214ENST00000545869 ADAMTS5Q9UNA0 930 aa28.28■■■□□ 2.12
PDCD2-214ENST00000545869 TRIM43BA6NCK2 446 aa28.27■■■□□ 2.12
PDCD2-214ENST00000545869 USP17L12C9JPN9 530 aa28.27■■■□□ 2.12
PDCD2-214ENST00000545869 USP17L21D6R901 530 aa28.27■■■□□ 2.12
PDCD2-214ENST00000545869 WDR46O15213 610 aaKnown RBP28.27■■■□□ 2.12
PDCD2-214ENST00000545869 PGK2P07205 417 aa28.27■■■□□ 2.12
PDCD2-214ENST00000545869 TRIM43Q96BQ3 446 aaPredicted RBP28.27■■■□□ 2.12
PDCD2-214ENST00000545869 ATP8A2Q9NTI2 1148 aa28.27■■■□□ 2.12
PDCD2-214ENST00000545869 EEF2P13639 858 aaKnown RBP28.26■■■□□ 2.11
PDCD2-214ENST00000545869 TAL1P17542 331 aaPredicted RBP28.26■■■□□ 2.11
PDCD2-214ENST00000545869 CHMLP26374 656 aa28.26■■■□□ 2.11
PDCD2-214ENST00000545869 NMIQ13287 307 aaPredicted RBP28.26■■■□□ 2.11
PDCD2-214ENST00000545869 C16orf86Q6ZW13 317 aa28.26■■■□□ 2.11
PDCD2-214ENST00000545869 OSBP2Q969R2 916 aa28.26■■■□□ 2.11
PDCD2-214ENST00000545869 COL25A1Q9BXS0 654 aaPredicted RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms