RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 TAX1BP1Q86VP1 789 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 IQCF2Q8IXL9 164 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 SAMD3Q8N6K7 520 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 HDAC7Q8WUI4 952 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 ALS2CR12Q96Q35 445 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 GPR108Q9NPR9 543 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 GPHNQ9NQX3 736 aaPredicted RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 RGS17Q9UGC6 210 aaPredicted RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 DENND2AQ9ULE3 1009 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 ZNF532Q9HCE3 1301 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 NAA25Q14CX7 972 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 EZH2Q15910 746 aaKnown RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 THEMIS2Q5TEJ8 643 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 MIS18BP1Q6P0N0 1132 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 SLC30A9Q6PML9 568 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 MTHFD1LQ6UB35 978 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 RUFY3Q7L099 469 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 RSRC2Q7L4I2 434 aaKnown RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 COL23A1Q86Y22 540 aaPredicted RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 POLR3CQ9BUI4 534 aaPredicted RBP7.52□□□□□ -1.21
NECAP1-208ENST00000545807 NYXQ9GZU5 481 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 ARMT1Q9H993 441 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 PDE11AQ9HCR9 933 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 TCHHQ07283 1943 aa7.52□□□□□ -1.21
NECAP1-208ENST00000545807 MROH5Q6ZUA9 1318 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 ERICH2A1L162 156 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 RIMBP2O15034 1052 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 GPAA1O43292 621 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 PRKAB2O43741 272 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 FAM200BP0CF97 657 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 HSPD1P10809 573 aaKnown RBP7.51□□□□□ -1.21
NECAP1-208ENST00000545807 VCAM1P19320 739 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 SYT1P21579 422 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 EIF4BP23588 611 aaKnown RBP7.51□□□□□ -1.21
NECAP1-208ENST00000545807 SMTNP53814 917 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 PLCB4Q15147 1175 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 KIAA0825Q8IV33 1275 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 MIPOL1Q8TD10 442 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 PHACTR1Q9C0D0 580 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 SLC39A2Q9NP94 309 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 DNAI1Q9UI46 699 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 CAPN7Q9Y6W3 813 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 COL4A1P02462 1669 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 PSDA5PKW4 1024 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-208ENST00000545807 MYO1FO00160 1098 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 EBAG9O00559 213 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 ATP6V1G1O75348 118 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 RNF8O76064 485 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 CCDC192P0DO97 292 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 UBE2HP62256 183 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 LRRFIP1Q32MZ4 808 aaKnown RBP7.51□□□□□ -1.21
NECAP1-208ENST00000545807 ZMYM1Q5SVZ6 1142 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 HOOK2Q96ED9 719 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 RBM41Q96IZ5 413 aaKnown RBP7.51□□□□□ -1.21
NECAP1-208ENST00000545807 RMDN2Q96LZ7 410 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 KLC4Q9NSK0 619 aa7.51□□□□□ -1.21
NECAP1-208ENST00000545807 FRMD3A2A2Y4 597 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 C6orf229H3BNL8 230 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 SMIM22K7EJ46 135 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 LIN7AO14910 233 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 SMNDC1O75940 238 aaKnown RBP eCLIP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 MBD4O95243 580 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 MMP10P09238 476 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 PDE6AP16499 860 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CYP11B2P19099 503 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 RPL13P26373 211 aaKnown RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 EVCP57679 992 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 MPP3Q13368 585 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 STOX1Q6ZVD7 989 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 AIDAQ96BJ3 306 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 PARD6BQ9BYG5 372 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 PLEKHA4Q9H4M7 779 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 GDPD2Q9HCC8 539 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 DNAAF2Q9NVR5 837 aaKnown RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CORO1CQ9ULV4 474 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 TESPA1A2RU30 521 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 EZRP15311 586 aaKnown RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 USP5P45974 858 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CDR1P51861 262 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 ATP2B2Q01814 1243 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 FOXD4Q12950 439 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 PRPF4BQ13523 1007 aaKnown RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CUL4AQ13619 759 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CAVIN4Q5BKX8 364 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CEP85LQ5SZL2 805 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CAPRIN2Q6IMN6 1127 aaKnown RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 C16orf87Q6PH81 154 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CCDC50Q8IVM0 306 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 RABGGTAQ92696 567 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 BRF1Q92994 677 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 SLC35B4Q969S0 331 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 PPP1R1BQ9UD71 204 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-208ENST00000545807 ZNF510Q9Y2H8 683 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 CARMIL3Q8ND23 1372 aa7.5□□□□□ -1.21
NECAP1-208ENST00000545807 E2F6O75461 281 aa7.49□□□□□ -1.21
NECAP1-208ENST00000545807 FGAP02671 866 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms