RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 SIPA1L1O43166 1804 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 RANBP6O60518 1105 aaKnown RBP13.95□□□□□ -0.18
LTBR-214ENST00000545445 PRDM1O75626 825 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 TSPY3P0CV98 308 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 TSPY8P0CW00 308 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 PSMA5P28066 241 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 CCDC178Q5BJE1 867 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 STK11IPQ8N1F8 1099 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 FAM161BQ96MY7 647 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 OGDHLQ9ULD0 1010 aa13.95□□□□□ -0.18
LTBR-214ENST00000545445 TSPY2A6NKD2 308 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 MDM2Q00987 491 aaPredicted RBP13.94□□□□□ -0.18
LTBR-214ENST00000545445 TFAP4Q01664 338 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 RRP12Q5JTH9 1297 aaKnown RBP13.94□□□□□ -0.18
LTBR-214ENST00000545445 IQCA1Q86XH1 822 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 NEDD1Q8NHV4 660 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 TRIB2Q92519 343 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 IL17RAQ96F46 866 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 MTA3Q9BTC8 594 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 C22orf23Q9BZE7 217 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 SNX14Q9Y5W7 946 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 PLIN4Q96Q06 1357 aa13.94□□□□□ -0.18
LTBR-214ENST00000545445 EYSQ5T1H1 3165 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 NEDD4P46934 1319 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 LAMA2P24043 3122 aaKnown RBP13.93□□□□□ -0.18
LTBR-214ENST00000545445 B4E1Z4 1266 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
LTBR-214ENST00000545445 GH2P01242 217 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 AKR1B1P15121 316 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 RBM25P49756 843 aaKnown RBP13.93□□□□□ -0.18
LTBR-214ENST00000545445 IL27Q8NEV9 243 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 KANSL2Q9H9L4 492 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 INCENPQ9NQS7 918 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 GJD2Q9UKL4 321 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 ZBTB21Q9ULJ3 1066 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 TACC3Q9Y6A5 838 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 DOCK1Q14185 1865 aa13.93□□□□□ -0.18
LTBR-214ENST00000545445 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 PTPRFP10586 1907 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 KDM4AO75164 1064 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 GDF11O95390 407 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 PRKAR2AP13861 404 aaKnown RBP13.92□□□□□ -0.18
LTBR-214ENST00000545445 MCM5P33992 734 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 RRP1BQ14684 758 aaKnown RBP13.92□□□□□ -0.18
LTBR-214ENST00000545445 SART3Q15020 963 aaKnown RBP13.92□□□□□ -0.18
LTBR-214ENST00000545445 LRRC26Q2I0M4 334 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 FAM47AQ5JRC9 791 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 STOX1Q6ZVD7 989 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 AS3MTQ9HBK9 375 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 ZSWIM5Q9P217 1185 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 TAF6LQ9Y6J9 622 aa13.92□□□□□ -0.18
LTBR-214ENST00000545445 IGKV6D-41A0A0C4DH26 115 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 CYP2B6P20813 491 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 GCLCP48506 637 aaPredicted RBP13.91□□□□□ -0.18
LTBR-214ENST00000545445 RAB3GAP1Q15042 981 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 MAP3K21Q5TCX8 1036 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
LTBR-214ENST00000545445 MB21D2Q8IYB1 491 aaPredicted RBP13.91□□□□□ -0.18
LTBR-214ENST00000545445 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
LTBR-214ENST00000545445 JAKMIP1Q96N16 626 aaKnown RBP13.91□□□□□ -0.18
LTBR-214ENST00000545445 TTC14Q96N46 770 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 WDR18Q9BV38 432 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 SYNPO2Q9UMS6 1093 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 PHIPQ8WWQ0 1821 aa13.91□□□□□ -0.18
LTBR-214ENST00000545445 ERICH2A1L162 156 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 PEX10O60683 326 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 TTLL1O95922 423 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 COL6A1P12109 1028 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 GUCY1A2P33402 732 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 NOVP48745 357 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 HMGCS2P54868 508 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 ICA1Q05084 483 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 SPP2Q13103 211 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 SEPT2Q15019 361 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 BLOC1S2Q6QNY1 142 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 DGKHQ86XP1 1220 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 TMEM87BQ96K49 555 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 TBC1D32Q96NH3 1257 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
LTBR-214ENST00000545445 ASCC2Q9H1I8 757 aaPredicted RBP13.9□□□□□ -0.18
LTBR-214ENST00000545445 SH2D4AQ9H788 454 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 MTMR4Q9NYA4 1195 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 NYAP2Q9P242 653 aa13.9□□□□□ -0.18
LTBR-214ENST00000545445 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 JAG1P78504 1218 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 FAM109BQ6ICB4 259 aaPredicted RBP13.89□□□□□ -0.19
LTBR-214ENST00000545445 TMTC2Q8N394 836 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 ANKS1AQ92625 1134 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms