RNA–Protein interactions for RNA: ENST00000544805.1

RNF10-222, Transcript of ring finger protein 10, human

TSL 2

Gene RNF10, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-222	ENST00000544805	TACO1	Q9BSH4	297 aa	Known RBP	10.3	□□□□□ -0.76
RNF10-222	ENST00000544805	COA1	Q9GZY4	146 aa		10.3	□□□□□ -0.76
RNF10-222	ENST00000544805	USP44	Q9H0E7	712 aa		10.3	□□□□□ -0.76
RNF10-222	ENST00000544805	DHX36	Q9H2U1	1008 aa	Known RBP	10.3	□□□□□ -0.76
RNF10-222	ENST00000544805	KCNQ5	Q9NR82	932 aa		10.3	□□□□□ -0.76
RNF10-222	ENST00000544805	GNE	Q9Y223	722 aa	Known RBP	10.3	□□□□□ -0.76
RNF10-222	ENST00000544805	MED23	Q9ULK4	1368 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	VIL1	P09327	827 aa	Known RBP	10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	XBP1	P17861	261 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	ABL2	P42684	1182 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	HTRA3	P83110	453 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	SEPT7	Q16181	437 aa	Known RBP	10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	CCDC158	Q5M9N0	1113 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	ATF7IP	Q6VMQ6	1270 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	SAMD7	Q7Z3H4	446 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	SULF1	Q8IWU6	871 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	PHC3	Q8NDX5	983 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	GIPC2	Q8TF65	315 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	DCPS	Q96C86	337 aa	Known RBP	10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	MAP3K14	Q99558	947 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	ZNF408	Q9H9D4	720 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	TMOD4	Q9NZQ9	345 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	ABT1	Q9ULW3	272 aa	Known RBP	10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	UTY	O14607	1347 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	MROH5	Q6ZUA9	1318 aa		10.29	□□□□□ -0.76
RNF10-222	ENST00000544805	SPEF2	Q9C093	1822 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	COL4A5	P29400	1685 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	WTIP	A6NIX2	430 aa	Predicted RBP	10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	DDX11L8	A8MPP1	907 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	FAM25E	A8MYX2	175 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	E2F6	O75461	281 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	USP17L8	P0C7I0	530 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	NOP2	P46087	812 aa	Known RBP	10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	GTF2I	P78347	998 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	GABPB1	Q06547	395 aa	Predicted RBP	10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	CCDC144B	Q3MJ40	725 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	CAVIN4	Q5BKX8	364 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	TTLL5	Q6EMB2	1281 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	NPAS4	Q8IUM7	802 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	ARL6IP6	Q8N6S5	226 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	ATRIP	Q8WXE1	791 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	DPF2	Q92785	391 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	TRIM6	Q9C030	488 aa	Predicted RBP	10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	SIL1	Q9H173	461 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	HDAC9	Q9UKV0	1011 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	LRRFIP2	Q9Y608	721 aa	Known RBP	10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	MYH3	P11055	1940 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	SCN4A	P35499	1836 aa		10.28	□□□□□ -0.76
RNF10-222	ENST00000544805	LRRC37A	A6NMS7	1700 aa		10.27	□□□□□ -0.76
RNF10-222	ENST00000544805	TMEM88B	A6NKF7	163 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	IFRD1	O00458	451 aa	Predicted RBP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	LDHA	P00338	332 aa	Known RBP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	IFIT1	P09914	478 aa	Known RBP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	CD46	P15529	392 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	RBM5	P52756	815 aa	Known RBP eCLIP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	GRM1	Q13255	1194 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	SEPT2	Q15019	361 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	TCEAL1	Q15170	157 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	PDCD2	Q16342	344 aa	Predicted RBP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	KIF4B	Q2VIQ3	1234 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	DAAM2	Q86T65	1068 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	RELL1	Q8IUW5	271 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	ITPRIP	Q8IWB1	547 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	AGBL3	Q8NEM8	1001 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	KLHDC4	Q8TBB5	520 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	CENPT	Q96BT3	561 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	C8orf48	Q96LL4	319 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	RNPC3	Q96LT9	517 aa	Known RBP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	UIMC1	Q96RL1	719 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	BEGAIN	Q9BUH8	593 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	PUS3	Q9BZE2	481 aa	Known RBP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	TANGO6	Q9C0B7	1094 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	PCDH12	Q9NPG4	1184 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	AVEN	Q9NQS1	362 aa	Predicted RBP	10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	ETAA1	Q9NY74	926 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	MKL2	Q9ULH7	1088 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	COL4A1	P02462	1669 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	MYO3B	Q8WXR4	1341 aa		10.27	□□□□□ -0.77
RNF10-222	ENST00000544805	DUOX1	Q9NRD9	1551 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	TMEM238L	A0A1B0GVL6	79 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	SNAP23	O00161	211 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	KIN	O60870	393 aa	Known RBP	10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	RPN1	P04843	607 aa	Known RBP	10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	GNAI2	P04899	355 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	RBP3	P10745	1247 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	IMPDH2	P12268	514 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	TRIM27	P14373	513 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	HOXD10	P28358	340 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	HIBADH	P31937	336 aa	Known RBP	10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	TAF11	Q15544	211 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	RABL6	Q3YEC7	729 aa	Predicted RBP	10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	LRRC24	Q50LG9	513 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	STRIP1	Q5VSL9	837 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	INTS3	Q68E01	1043 aa	Known RBP	10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	CDC37L1	Q7L3B6	337 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	TRIM74	Q86UV6	250 aa		10.26	□□□□□ -0.77
RNF10-222	ENST00000544805	TRIM73	Q86UV7	250 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms