RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PPP2R5BQ15173 497 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 ATL3Q6DD88 541 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 CCDC84Q86UT8 332 aaPredicted RBP15.72■□□□□ 0.11
HCFC2-202ENST00000544223 DDX19AQ9NUU7 478 aaKnown RBP15.72■□□□□ 0.11
HCFC2-202ENST00000544223 FOXN1O15353 648 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 VIL1P09327 827 aaKnown RBP15.72■□□□□ 0.11
HCFC2-202ENST00000544223 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
HCFC2-202ENST00000544223 COA7Q96BR5 231 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 GMLQ99445 158 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 ZNRF3Q9ULT6 936 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 MYH4Q9Y623 1939 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 ZNF202O95125 648 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 XBP1P17861 261 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 TNFRSF25Q93038 417 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 IDI2Q9BXS1 227 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 IGKV6D-41A0A0C4DH26 115 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 IGSF3O75054 1194 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 EEF2P13639 858 aaKnown RBP15.71■□□□□ 0.11
HCFC2-202ENST00000544223 MCM7P33993 719 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 PTGER2P43116 358 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 DLGAP5Q15398 846 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 C11orf57Q6ZUT1 292 aaPredicted RBP15.71■□□□□ 0.11
HCFC2-202ENST00000544223 GRAMD1CQ8IYS0 662 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 SPICE1Q8N0Z3 855 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 OGFOD1Q8N543 542 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 UPF1Q92900 1129 aaKnown RBP eCLIP15.71■□□□□ 0.11
HCFC2-202ENST00000544223 TAOK3Q9H2K8 898 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 PI4KBQ9UBF8 816 aa15.71■□□□□ 0.11
HCFC2-202ENST00000544223 TTLL1O95922 423 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 CCDC192P0DO97 292 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 CDC25AP30304 524 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 SIAH1Q8IUQ4 282 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 ZNF70Q9UC06 446 aaPredicted RBP15.7■□□□□ 0.1
HCFC2-202ENST00000544223 GJA3Q9Y6H8 435 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 GH2P01242 217 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 TGFB2P61812 414 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 CCDC96Q2M329 555 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 EPSTI1Q96J88 318 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 UIMC1Q96RL1 719 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 SGIP1Q9BQI5 828 aa15.7■□□□□ 0.1
HCFC2-202ENST00000544223 STXBP3O00186 592 aa15.69■□□□□ 0.1
HCFC2-202ENST00000544223 FKBP1AP62942 108 aaKnown RBP15.69■□□□□ 0.1
HCFC2-202ENST00000544223 LONRF3Q496Y0 759 aa15.69■□□□□ 0.1
HCFC2-202ENST00000544223 SAMD7Q7Z3H4 446 aa15.69■□□□□ 0.1
HCFC2-202ENST00000544223 CSRNP2Q9H175 543 aa15.69■□□□□ 0.1
HCFC2-202ENST00000544223 FBXO2Q9UK22 296 aaPredicted RBP15.69■□□□□ 0.1
HCFC2-202ENST00000544223 FZD1Q9UP38 647 aa15.69■□□□□ 0.1
HCFC2-202ENST00000544223 LETM1O95202 739 aaPredicted RBP15.69■□□□□ 0.1
HCFC2-202ENST00000544223 RILPL1Q5EBL4 403 aa15.69■□□□□ 0.1
HCFC2-202ENST00000544223 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
HCFC2-202ENST00000544223 TMEM260Q9NX78 707 aa15.69■□□□□ 0.1
HCFC2-202ENST00000544223 A0A1W2PQ27 194 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 A0A1W2PQ64 194 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 A0A1W2PQD8 194 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 CMA1P23946 247 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 NAPAP54920 295 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 HDLBPQ00341 1268 aaKnown RBP15.68■□□□□ 0.1
HCFC2-202ENST00000544223 PNOCQ13519 176 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 INF2Q27J81 1249 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 SASS6Q6UVJ0 657 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 BLIDQ8IZY5 108 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
HCFC2-202ENST00000544223 SWAP70Q9UH65 585 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 USP17L10C9JJH3 530 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 PPP1R11O60927 126 aaPredicted RBP15.68■□□□□ 0.1
HCFC2-202ENST00000544223 CASP1P29466 404 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 ECE1P42892 770 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 SYKP43405 635 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 ZYXQ15942 572 aaKnown RBP15.68■□□□□ 0.1
HCFC2-202ENST00000544223 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 MRIQ9BWK5 157 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 CBX8Q9HC52 389 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 BIN2Q9UBW5 565 aaPredicted RBP15.68■□□□□ 0.1
HCFC2-202ENST00000544223 CNTNAP1P78357 1384 aa15.68■□□□□ 0.1
HCFC2-202ENST00000544223 A0A087X0B3 334 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 TRIM75PA6NK02 468 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 WNT10BO00744 389 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 PTGDRQ13258 359 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 PRAMEF18Q5VWM3 479 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 RBM43Q6ZSC3 357 aaKnown RBP15.67■□□□□ 0.1
HCFC2-202ENST00000544223 CCDC125Q86Z20 511 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 ADGRF4Q8IZF3 695 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 BARHL2Q9NY43 387 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 PCDHA6Q9UN73 950 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 PCDHA8Q9Y5H6 950 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 BRCA1P38398 1863 aaKnown RBP15.67■□□□□ 0.1
HCFC2-202ENST00000544223 A0A1W2PRG0 241 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 VWA3AA6NCI4 1184 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 PPP6R2O75170 966 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 NOVP48745 357 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 IL17AQ16552 155 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 TBC1D10BQ4KMP7 808 aaPredicted RBP15.67■□□□□ 0.1
HCFC2-202ENST00000544223 CCDC178Q5BJE1 867 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 TTC38Q5R3I4 469 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 JAKMIP3Q5VZ66 844 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 RESP18Q5W5W9 173 aa15.67■□□□□ 0.1
HCFC2-202ENST00000544223 DHX36Q9H2U1 1008 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms