RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 MX1P20591 662 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 RASA1P20936 1047 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 CYP2C19P33261 490 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 ZNF444Q8N0Y2 327 aaPredicted RBP15.66■□□□□ 0.1
RTN3-213ENST00000543552 NPLOC4Q8TAT6 608 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 NYAP2Q9P242 653 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 PPP1R9AQ9ULJ8 1098 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 SYNPO2Q9UMS6 1093 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 ALPK3Q96L96 1907 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 LAMA3Q16787 3333 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 PFASO15067 1338 aa15.66■□□□□ 0.1
RTN3-213ENST00000543552 GREB1LQ9C091 1923 aaPredicted RBP15.65■□□□□ 0.1
RTN3-213ENST00000543552 PATL2C9JE40 543 aaKnown RBP15.65■□□□□ 0.1
RTN3-213ENST00000543552 PDE4BQ07343 736 aa15.65■□□□□ 0.1
RTN3-213ENST00000543552 TMEM132BQ14DG7 1078 aa15.65■□□□□ 0.1
RTN3-213ENST00000543552 PI4K2BQ8TCG2 481 aa15.65■□□□□ 0.1
RTN3-213ENST00000543552 ADAMTS5Q9UNA0 930 aa15.65■□□□□ 0.1
RTN3-213ENST00000543552 PARP14Q460N5 1801 aa15.65■□□□□ 0.1
RTN3-213ENST00000543552 FRMPD3Q5JV73 1810 aa15.65■□□□□ 0.1
RTN3-213ENST00000543552 DNAH12Q6ZR08 3092 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 M0R2C6 588 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 DNM1LO00429 736 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 VWA5AO00534 786 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 CYBAP13498 195 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 KCTD2Q14681 263 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 FAM83BQ5T0W9 1011 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 RIOX2Q8IUF8 465 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 ARRDC4Q8NCT1 418 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 MMP19Q99542 508 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 SLF1Q9BQI6 1058 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.64■□□□□ 0.09
RTN3-213ENST00000543552 NAPBQ9H115 298 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 EPB41L4AQ9HCS5 686 aaPredicted RBP15.64■□□□□ 0.09
RTN3-213ENST00000543552 FBXO28Q9NVF7 368 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 STAP2Q9UGK3 403 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 NRBP1Q9UHY1 535 aa15.64■□□□□ 0.09
RTN3-213ENST00000543552 ZMYND8Q9ULU4 1186 aaPredicted RBP15.64■□□□□ 0.09
RTN3-213ENST00000543552 CTDP1Q9Y5B0 961 aaPredicted RBP15.64■□□□□ 0.09
RTN3-213ENST00000543552 SEPT4O43236 478 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 IGHA2P01877 340 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 BMP8BP34820 402 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 STAT3P40763 770 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 AAMPQ13685 434 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 IFNL3Q8IZI9 196 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 STK11IPQ8N1F8 1099 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 TEX13BQ9BXU2 312 aa15.63■□□□□ 0.09
RTN3-213ENST00000543552 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 KBTBD13C9JR72 458 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 F5H6K3 240 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 COBLO75128 1261 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 TTLL1O95922 423 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 NDUFB10O96000 172 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 KLRC3Q07444 240 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 ZMYM1Q5SVZ6 1142 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 PRPF38AQ8NAV1 312 aaKnown RBP15.62■□□□□ 0.09
RTN3-213ENST00000543552 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 GDF15Q99988 308 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
RTN3-213ENST00000543552 ZNF214Q9UL59 606 aaPredicted RBP15.62■□□□□ 0.09
RTN3-213ENST00000543552 DIS3Q9Y2L1 958 aaKnown RBP15.62■□□□□ 0.09
RTN3-213ENST00000543552 ZBED4O75132 1171 aa15.61■□□□□ 0.09
RTN3-213ENST00000543552 TSPY3P0CV98 308 aa15.61■□□□□ 0.09
RTN3-213ENST00000543552 TSPY8P0CW00 308 aa15.61■□□□□ 0.09
RTN3-213ENST00000543552 HDAC1Q13547 482 aaPredicted RBP15.61■□□□□ 0.09
RTN3-213ENST00000543552 ANKRD45Q5TZF3 282 aa15.61■□□□□ 0.09
RTN3-213ENST00000543552 TICAM2Q86XR7 235 aa15.61■□□□□ 0.09
RTN3-213ENST00000543552 TRPV1Q8NER1 839 aa15.61■□□□□ 0.09
RTN3-213ENST00000543552 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
RTN3-213ENST00000543552 SENP6Q9GZR1 1112 aaPredicted RBP15.61■□□□□ 0.09
RTN3-213ENST00000543552 MTMR4Q9NYA4 1195 aa15.61■□□□□ 0.09
RTN3-213ENST00000543552 COL11A1P12107 1806 aaPredicted RBP15.61■□□□□ 0.09
RTN3-213ENST00000543552 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 PRDM1O75626 825 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 SYN1P17600 705 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 MAGEA10P43363 369 aaPredicted RBP15.6■□□□□ 0.09
RTN3-213ENST00000543552 PPARAQ07869 468 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 LRRC26Q2I0M4 334 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 SNRNP48Q6IEG0 339 aaKnown RBP15.6■□□□□ 0.09
RTN3-213ENST00000543552 GMCL1P1Q8NEA9 526 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 MKL1Q969V6 931 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 EVI5LQ96CN4 794 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 CEP95Q96GE4 821 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 CRBNQ96SW2 442 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 NUP88Q99567 741 aaPredicted RBP15.6■□□□□ 0.09
RTN3-213ENST00000543552 PRKAG2Q9UGJ0 569 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 FEM1BQ9UK73 627 aa15.6■□□□□ 0.09
RTN3-213ENST00000543552 MYH4Q9Y623 1939 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 ATP2A1O14983 1001 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 FDX1P10109 184 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 MSL3Q8N5Y2 521 aaKnown RBP15.59■□□□□ 0.09
RTN3-213ENST00000543552 REPS2Q8NFH8 660 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 NEDD1Q8NHV4 660 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
RTN3-213ENST00000543552 TINF2Q9BSI4 451 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 UBE2OQ9C0C9 1292 aaKnown RBP15.59■□□□□ 0.09
RTN3-213ENST00000543552 CNPY2Q9Y2B0 182 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 SALL3Q9BXA9 1300 aa15.59■□□□□ 0.09
RTN3-213ENST00000543552 PGK2P07205 417 aa15.58■□□□□ 0.08
RTN3-213ENST00000543552 RARBP10826 455 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms