RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 MROH8Q9H579 483 aa23.55■■□□□ 1.36
CACNA1C-230ENST00000543114 EPB41L4AQ9HCS5 686 aaPredicted RBP23.55■■□□□ 1.36
CACNA1C-230ENST00000543114 COL6A3P12111 3177 aa23.54■■□□□ 1.36
CACNA1C-230ENST00000543114 GSG1L2A8MUP6 293 aa23.54■■□□□ 1.36
CACNA1C-230ENST00000543114 RASA1P20936 1047 aa23.53■■□□□ 1.36
CACNA1C-230ENST00000543114 SBK1Q52WX2 424 aa23.53■■□□□ 1.36
CACNA1C-230ENST00000543114 ABRAQ8N0Z2 381 aa23.53■■□□□ 1.36
CACNA1C-230ENST00000543114 STK11IPQ8N1F8 1099 aa23.53■■□□□ 1.36
CACNA1C-230ENST00000543114 GOPCQ9HD26 462 aa23.53■■□□□ 1.36
CACNA1C-230ENST00000543114 ADAMTS5Q9UNA0 930 aa23.53■■□□□ 1.36
CACNA1C-230ENST00000543114 DNM1LO00429 736 aa23.52■■□□□ 1.36
CACNA1C-230ENST00000543114 GPAA1O43292 621 aa23.52■■□□□ 1.36
CACNA1C-230ENST00000543114 FAM83BQ5T0W9 1011 aa23.52■■□□□ 1.36
CACNA1C-230ENST00000543114 SENP6Q9GZR1 1112 aaPredicted RBP23.52■■□□□ 1.36
CACNA1C-230ENST00000543114 LTBP2Q14767 1821 aa23.52■■□□□ 1.36
CACNA1C-230ENST00000543114 M0R2C6 588 aa23.51■■□□□ 1.35
CACNA1C-230ENST00000543114 RNF113AO15541 343 aaKnown RBP23.51■■□□□ 1.35
CACNA1C-230ENST00000543114 RAD21O60216 631 aa23.51■■□□□ 1.35
CACNA1C-230ENST00000543114 ANO1Q5XXA6 986 aa23.51■■□□□ 1.35
CACNA1C-230ENST00000543114 GIMAP6Q6P9H5 292 aa23.51■■□□□ 1.35
CACNA1C-230ENST00000543114 MAML3Q96JK9 1138 aa23.51■■□□□ 1.35
CACNA1C-230ENST00000543114 PPP1R9AQ9ULJ8 1098 aa23.51■■□□□ 1.35
CACNA1C-230ENST00000543114 MINDY4BA8MYZ0 360 aa23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 VWA5AO00534 786 aa23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 FCER1AP12319 257 aa23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 ATN1P54259 1190 aaPredicted RBP23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 TDHQ8IZJ6 230 aa23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 REPS2Q8NFH8 660 aa23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 SLC5A4Q9NY91 659 aa23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 ZNF214Q9UL59 606 aaPredicted RBP23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 LAMA2P24043 3122 aaKnown RBP23.5■■□□□ 1.35
CACNA1C-230ENST00000543114 SMCHD1A6NHR9 2005 aa23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 SEPT4O43236 478 aa23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 SLC25A27O95847 323 aa23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 ZFYP08048 801 aaPredicted RBP23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 GJC2Q5T442 439 aaPredicted RBP23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 RIOX2Q8IUF8 465 aa23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 OTUD7AQ8TE49 926 aaPredicted RBP23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 NUP88Q99567 741 aaPredicted RBP23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 UBE2OQ9C0C9 1292 aaKnown RBP23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 PCDHB15Q9Y5E8 787 aa23.49■■□□□ 1.35
CACNA1C-230ENST00000543114 TDO2P48775 406 aa23.48■■□□□ 1.35
CACNA1C-230ENST00000543114 PRAMEF19Q5SWL8 479 aa23.48■■□□□ 1.35
CACNA1C-230ENST00000543114 PI4K2BQ8TCG2 481 aa23.48■■□□□ 1.35
CACNA1C-230ENST00000543114 MMP19Q99542 508 aa23.48■■□□□ 1.35
CACNA1C-230ENST00000543114 MKNK2Q9HBH9 465 aa23.48■■□□□ 1.35
CACNA1C-230ENST00000543114 IGKV6D-41A0A0C4DH26 115 aa23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 NDUFB10O96000 172 aa23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 PGK2P07205 417 aa23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 GNAT2P19087 354 aa23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 MDM2Q00987 491 aaPredicted RBP23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 LRIT3Q3SXY7 679 aa23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 NYAP2Q9P242 653 aa23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 TTC41PQ6P2S7 1318 aa23.47■■□□□ 1.35
CACNA1C-230ENST00000543114 PRDM1O75626 825 aa23.46■■□□□ 1.35
CACNA1C-230ENST00000543114 STAT3P40763 770 aa23.46■■□□□ 1.35
CACNA1C-230ENST00000543114 FAM47AQ5JRC9 791 aa23.46■■□□□ 1.35
CACNA1C-230ENST00000543114 SEC62Q99442 399 aaKnown RBP23.46■■□□□ 1.35
CACNA1C-230ENST00000543114 KBTBD13C9JR72 458 aa23.45■■□□□ 1.34
CACNA1C-230ENST00000543114 F5H6K3 240 aa23.45■■□□□ 1.34
CACNA1C-230ENST00000543114 RTP1P59025 263 aa23.45■■□□□ 1.34
CACNA1C-230ENST00000543114 KLRC3Q07444 240 aa23.45■■□□□ 1.34
CACNA1C-230ENST00000543114 KCTD2Q14681 263 aa23.45■■□□□ 1.34
CACNA1C-230ENST00000543114 ARRDC4Q8NCT1 418 aa23.45■■□□□ 1.34
CACNA1C-230ENST00000543114 SLF1Q9BQI6 1058 aa23.45■■□□□ 1.34
CACNA1C-230ENST00000543114 PLIN4Q96Q06 1357 aa23.44■■□□□ 1.34
CACNA1C-230ENST00000543114 MYCNP04198 464 aaPredicted RBP23.44■■□□□ 1.34
CACNA1C-230ENST00000543114 APPP05067 770 aa23.44■■□□□ 1.34
CACNA1C-230ENST00000543114 ZNF792Q3KQV3 632 aa23.44■■□□□ 1.34
CACNA1C-230ENST00000543114 IFNL3Q8IZI9 196 aa23.44■■□□□ 1.34
CACNA1C-230ENST00000543114 CEP95Q96GE4 821 aa23.44■■□□□ 1.34
CACNA1C-230ENST00000543114 PATL2C9JE40 543 aaKnown RBP23.43■■□□□ 1.34
CACNA1C-230ENST00000543114 ERC2O15083 957 aa23.43■■□□□ 1.34
CACNA1C-230ENST00000543114 COPB2P35606 906 aa23.43■■□□□ 1.34
CACNA1C-230ENST00000543114 FSD1Q9BTV5 496 aa23.43■■□□□ 1.34
CACNA1C-230ENST00000543114 TEX13BQ9BXU2 312 aa23.43■■□□□ 1.34
CACNA1C-230ENST00000543114 CLIP2Q9UDT6 1046 aa23.43■■□□□ 1.34
CACNA1C-230ENST00000543114 LRRC41Q15345 812 aa23.42■■□□□ 1.34
CACNA1C-230ENST00000543114 SNRNP48Q6IEG0 339 aaKnown RBP23.42■■□□□ 1.34
CACNA1C-230ENST00000543114 LRRC47Q8N1G4 583 aaKnown RBP23.42■■□□□ 1.34
CACNA1C-230ENST00000543114 TINF2Q9BSI4 451 aa23.42■■□□□ 1.34
CACNA1C-230ENST00000543114 NRBP1Q9UHY1 535 aa23.42■■□□□ 1.34
CACNA1C-230ENST00000543114 ATP11BQ9Y2G3 1177 aa23.42■■□□□ 1.34
CACNA1C-230ENST00000543114 SALL3Q9BXA9 1300 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 TAL1P17542 331 aaPredicted RBP23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 MX1P20591 662 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 SNX17Q15036 470 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 LRRFIP1Q32MZ4 808 aaKnown RBP23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 GPR153Q6NV75 609 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 SLC39A5Q6ZMH5 540 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 Q7L0L9 218 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 MTMR4Q9NYA4 1195 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 DIS3Q9Y2L1 958 aaKnown RBP23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 RIPK3Q9Y572 518 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 MCM3APO60318 1980 aa23.41■■□□□ 1.34
CACNA1C-230ENST00000543114 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
CACNA1C-230ENST00000543114 TRIM60Q495X7 471 aa23.4■■□□□ 1.34
CACNA1C-230ENST00000543114 ZMYM1Q5SVZ6 1142 aa23.4■■□□□ 1.34
CACNA1C-230ENST00000543114 ZNF444Q8N0Y2 327 aaPredicted RBP23.4■■□□□ 1.34
CACNA1C-230ENST00000543114 PRPF38AQ8NAV1 312 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms