RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
CALU-206ENST00000542996 CUTAO60888 179 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 JAG1P78504 1218 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 RTN1Q16799 776 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 CNNM3Q8NE01 707 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 FUT8Q9BYC5 575 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
CALU-206ENST00000542996 CPLX1O14810 134 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
CALU-206ENST00000542996 TICAM2Q86XR7 235 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 ZNF507Q8TCN5 953 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 CCT6AP40227 531 aaKnown RBP12.13□□□□□ -0.47
CALU-206ENST00000542996 CPLX3Q8WVH0 158 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 PSDA5PKW4 1024 aaPredicted RBP12.13□□□□□ -0.47
CALU-206ENST00000542996 BECN2A8MW95 431 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 SRGAP2O75044 1071 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 ATP2C1P98194 919 aaPredicted RBP12.13□□□□□ -0.47
CALU-206ENST00000542996 WTAPQ15007 396 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
CALU-206ENST00000542996 CCDC112Q8NEF3 446 aa12.13□□□□□ -0.47
CALU-206ENST00000542996 ZNFX1Q9P2E3 1918 aaKnown RBP12.12□□□□□ -0.47
CALU-206ENST00000542996 THSD7AQ9UPZ6 1657 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 GOLGA6L19H0YKK7 550 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 EXOC5O00471 708 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 FCER1AP12319 257 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 KLHL10Q6JEL2 608 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 LRRC10BA6NIK2 292 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 HERVK_113P62684 666 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 KRT31Q15323 416 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 SYCP1Q15431 976 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 MIIPQ5JXC2 388 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 DPY19L2P1Q6NXN4 242 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 SMARCAL1Q9NZC9 954 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 BRWD3Q6RI45 1802 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 ENOX1Q8TC92 643 aaKnown RBP12.12□□□□□ -0.47
CALU-206ENST00000542996 KANSL2Q9H9L4 492 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 EHD2Q9NZN4 543 aa12.12□□□□□ -0.47
CALU-206ENST00000542996 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
CALU-206ENST00000542996 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
CALU-206ENST00000542996 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
CALU-206ENST00000542996 PIK3AP1Q6ZUJ8 805 aa12.11□□□□□ -0.47
CALU-206ENST00000542996 ZFPM1Q8IX07 1006 aa12.11□□□□□ -0.47
CALU-206ENST00000542996 BSDC1Q9NW68 430 aaPredicted RBP12.11□□□□□ -0.47
CALU-206ENST00000542996 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
CALU-206ENST00000542996 LZTFL1Q9NQ48 299 aa12.11□□□□□ -0.47
CALU-206ENST00000542996 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
CALU-206ENST00000542996 SMCR8Q8TEV9 937 aaPredicted RBP12.11□□□□□ -0.47
CALU-206ENST00000542996 ZNF185O15231 689 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 TDO2P48775 406 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 STK4Q13043 487 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 HDAC7Q8WUI4 952 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 DDX4Q9NQI0 724 aaKnown RBP12.1□□□□□ -0.47
CALU-206ENST00000542996 TMEM260Q9NX78 707 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 PCDHA6Q9UN73 950 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 PAXBP1Q9Y5B6 917 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 PCDHA8Q9Y5H6 950 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 WDFY3Q8IZQ1 3526 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
CALU-206ENST00000542996 UTP14CQ5TAP6 766 aaKnown RBP12.1□□□□□ -0.47
CALU-206ENST00000542996 PROM2Q8N271 834 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 KIAA0895Q8NCT3 520 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
CALU-206ENST00000542996 LRRC37AA6NMS7 1700 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 PRPF3O43395 683 aaKnown RBP12.1□□□□□ -0.47
CALU-206ENST00000542996 KCNJ6P48051 423 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 RHBDL3P58872 404 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 RANBP2P49792 3224 aaKnown RBP12.1□□□□□ -0.47
CALU-206ENST00000542996 LRP2BPQ9P2M1 347 aa12.1□□□□□ -0.47
CALU-206ENST00000542996 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
CALU-206ENST00000542996 SLC5A1P13866 664 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
CALU-206ENST00000542996 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 SYNE3Q6ZMZ3 975 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
CALU-206ENST00000542996 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 ENC1O14682 589 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 MCM7P33993 719 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 TRADDQ15628 312 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 OGFRQ9NZT2 677 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 MAGEB6P1A0A0J9YX57 407 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 TTC26A0AVF1 554 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 SPECC1LQ69YQ0 1117 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
CALU-206ENST00000542996 ATAD5Q96QE3 1844 aa12.08□□□□□ -0.47
CALU-206ENST00000542996 LRRIQ3A6PVS8 624 aaPredicted RBP12.08□□□□□ -0.48
CALU-206ENST00000542996 SLC37A4O43826 429 aa12.08□□□□□ -0.48
CALU-206ENST00000542996 DEXIO95424 95 aa12.08□□□□□ -0.48
CALU-206ENST00000542996 SFPQP23246 707 aaKnown RBP eCLIP12.08□□□□□ -0.48
CALU-206ENST00000542996 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
CALU-206ENST00000542996 SLC10A5Q5PT55 438 aa12.08□□□□□ -0.48
CALU-206ENST00000542996 CC2D1AQ6P1N0 951 aaPredicted RBP12.08□□□□□ -0.48
CALU-206ENST00000542996 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
CALU-206ENST00000542996 MPHOSPH8Q99549 860 aa12.08□□□□□ -0.48
CALU-206ENST00000542996 RTFDC1Q9BY42 306 aaPredicted RBP12.08□□□□□ -0.48
CALU-206ENST00000542996 RNF26Q9BY78 433 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms