RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 MAP3K12Q12852 859 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 GRB14Q14449 540 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 C9orf50Q5SZB4 431 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 GJC2Q5T442 439 aaPredicted RBP13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 SLC39A5Q6ZMH5 540 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 MYLIPQ8WY64 445 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 APPBP2Q92624 585 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 ANTXR1Q9H6X2 564 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 SAP30BPQ9UHR5 308 aaKnown RBP13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 CYBAP13498 195 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 HSPA4P34932 840 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 ADD2P35612 726 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 BECN1Q14457 450 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 RABEP1Q15276 862 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 LBX2Q6XYB7 198 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 TRPV1Q8NER1 839 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 NPLOC4Q8TAT6 608 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 BADQ92934 168 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 FAM227BQ96M60 508 aa13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 TTYH1Q9H313 450 aaPredicted RBP13.71□□□□□ -0.21
SRGAP1-205ENST00000542841 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 VCAM1P19320 739 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 TATDN1Q6P1N9 297 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 ADGRA1Q86SQ6 560 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 KIAA1683Q9H0B3 1180 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 IL25Q9H293 177 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 BTBD7Q9P203 1132 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
SRGAP1-205ENST00000542841 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 SNX17Q15036 470 aa13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 KCNB2Q92953 911 aa13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 SNX21Q969T3 373 aa13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 KIF2CQ99661 725 aa13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 DSCC1Q9BVC3 393 aa13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 PIH1D3Q9NQM4 214 aaKnown RBP13.69□□□□□ -0.22
SRGAP1-205ENST00000542841 TMEM265A0A087WTH1 108 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 SEPT4O43236 478 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 STRNO43815 780 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 IGHA2P01877 340 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 ADORA2AP29274 412 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 ABCB5Q2M3G0 1257 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 CERKLQ49MI3 558 aaPredicted RBP13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 RNF20Q5VTR2 975 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 RPAP3Q9H6T3 665 aaPredicted RBP13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 CABP5Q9NP86 173 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 PDLIM7Q9NR12 457 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 SERPINB13Q9UIV8 391 aa13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
SRGAP1-205ENST00000542841 FOCADQ5VW36 1801 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 RLFQ13129 1914 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 TRIM43BA6NCK2 446 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 IDH1O75874 414 aaKnown RBP13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 PDE6AP16499 860 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 ADCYAP1R1P41586 468 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 USP5P45974 858 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 DYNLL1P63167 89 aaKnown RBP13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 NECTIN1Q15223 517 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 SLC9C2Q5TAH2 1124 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 ANO1Q5XXA6 986 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 SH3RF1Q7Z6J0 888 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 ZNF589Q86UQ0 364 aaPredicted RBP13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 ACER1Q8TDN7 264 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 TRIM43Q96BQ3 446 aaPredicted RBP13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 RNPC3Q96LT9 517 aaKnown RBP13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 EHD4Q9H223 541 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
SRGAP1-205ENST00000542841 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 COG2Q14746 738 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 LRRC41Q15345 812 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 TSGA10IPQ3SY00 556 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 TJAP1Q5JTD0 557 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 TTC6Q86TZ1 520 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 FERMT2Q96AC1 680 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 MOV10L1Q9BXT6 1211 aaKnown RBP13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 HOXC10Q9NYD6 342 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
SRGAP1-205ENST00000542841 ZMYM6O95789 1325 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 ZNF532Q9HCE3 1301 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 CDK5RAP2Q96SN8 1893 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 GNAT2P19087 354 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 CYP7A1P22680 504 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 PTH1RQ03431 593 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 SPATC1LQ9H0A9 340 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
SRGAP1-205ENST00000542841 M0R2C6 588 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms