RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FSIP1Q8NA03 581 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 CSRNP1Q96S65 589 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 TMEM39BQ9GZU3 492 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 VEZTQ9HBM0 779 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 CABP5Q9NP86 173 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 ASTN2O75129 1339 aaPredicted RBP14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 ZNF541Q9H0D2 1346 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 LTBP3Q9NS15 1303 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 WNT10BO00744 389 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 ATP2B1P20020 1258 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 MRE11P49959 708 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 L1TD1Q5T7N2 865 aaKnown RBP14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 OGFOD1Q8N543 542 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 MTMR14Q8NCE2 650 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 JDP2Q8WYK2 163 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 CLIC6Q96NY7 704 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 SPZ1Q9BXG8 430 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 CLSTN2Q9H4D0 955 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 VAT1LQ9HCJ6 419 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 GPCPD1Q9NPB8 672 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 PGAP2Q9UHJ9 254 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 STXBP3O00186 592 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 EEF2P13639 858 aaKnown RBP14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 GNAQP50148 359 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 FOXP4Q8IVH2 680 aaPredicted RBP14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 RASGRP4Q8TDF6 673 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 FAM151AQ8WW52 585 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 PIGSQ96S52 555 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 NUP62CLQ9H1M0 184 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 MYOZ2Q9NPC6 264 aa14.13□□□□□ -0.15
AP003559.1-201ENST00000540906 GMPSP49915 693 aaPredicted RBP14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 NDUFA8P51970 172 aa14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 NLRP5P59047 1200 aa14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 RBM26Q5T8P6 1007 aaKnown RBP14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 ADALQ6DHV7 355 aa14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 HOMER1Q86YM7 354 aa14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 RNF214Q8ND24 703 aa14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 CCDC17Q96LX7 622 aa14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 TSPY26PQ9H489 355 aa14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
AP003559.1-201ENST00000540906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 A0A1W2PQ27 194 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 A0A1W2PQ64 194 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 A0A1W2PQD8 194 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 FZD9O00144 591 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 GH2P01242 217 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 ZNF280AP59817 542 aaPredicted RBP14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 ZNF543Q08ER8 600 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 SHC4Q6S5L8 630 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 FMR1NBQ8N0W7 255 aaPredicted RBP14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 MRPS27Q92552 414 aaKnown RBP14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 RIOX1Q9H6W3 641 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 GJA3Q9Y6H8 435 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 A0A087WWV3 80 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 M0R2N6 131 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 XBP1P17861 261 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 SLC16A2P36021 539 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 ABCB5Q2M3G0 1257 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 RBM43Q6ZSC3 357 aaKnown RBP14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 SAMD7Q7Z3H4 446 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 DDX19AQ9NUU7 478 aaKnown RBP14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 TMOD2Q9NZR1 351 aa14.11□□□□□ -0.15
AP003559.1-201ENST00000540906 PPP1R11O60927 126 aaPredicted RBP14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 PPP6R2O75170 966 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 FAM160A1Q05DH4 1040 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 RILPL1Q5EBL4 403 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 SPECC1Q5M775 1068 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 PIK3AP1Q6ZUJ8 805 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 MICALL2Q8IY33 904 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 ERCC4Q92889 916 aaPredicted RBP14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 LZTS2Q9BRK4 669 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 TRIM34Q9BYJ4 488 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 BARHL2Q9NY43 387 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 NYAP2Q9P242 653 aa14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 FBXO2Q9UK22 296 aaPredicted RBP14.1□□□□□ -0.15
AP003559.1-201ENST00000540906 A0A1W2PRG0 241 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 PFKFB1P16118 471 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 ICA1Q05084 483 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 TNIP1Q15025 636 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 TBC1D10BQ4KMP7 808 aaPredicted RBP14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 ASPRV1Q53RT3 343 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 KIAA1755Q5JYT7 1200 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 TMEM179Q6ZVK1 233 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 MIGA2Q7L4E1 593 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 BLIDQ8IZY5 108 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 MKL1Q969V6 931 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 NUP88Q99567 741 aaPredicted RBP14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 TNMDQ9H2S6 317 aa14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.09□□□□□ -0.15
AP003559.1-201ENST00000540906 ZNF174Q15697 407 aa14.08□□□□□ -0.15
AP003559.1-201ENST00000540906 MAP3K11Q16584 847 aa14.08□□□□□ -0.15
AP003559.1-201ENST00000540906 CCDC96Q2M329 555 aa14.08□□□□□ -0.15
AP003559.1-201ENST00000540906 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms