RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 LZTS2Q9BRK4 669 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 NYAP2Q9P242 653 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 RBM27Q9P2N5 1060 aaKnown RBP16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 ATAD5Q96QE3 1844 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
CYB561A3-216ENST00000540755 CA12O43570 354 aa16.49■□□□□ 0.23
CYB561A3-216ENST00000540755 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
CYB561A3-216ENST00000540755 MKL1Q969V6 931 aa16.49■□□□□ 0.23
CYB561A3-216ENST00000540755 CLIP2Q9UDT6 1046 aa16.49■□□□□ 0.23
CYB561A3-216ENST00000540755 CASP8AP2Q9UKL3 1982 aa16.49■□□□□ 0.23
CYB561A3-216ENST00000540755 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 GUCY1B3Q02153 619 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 TRIM29Q14134 588 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 KRT40Q6A162 431 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 C2orf69Q8N8R5 385 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 CHAMP1Q96JM3 812 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 TEPSINQ96N21 525 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 AIFM3Q96NN9 605 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 UBE2Q2LH0YL09 131 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 GDF11O95390 407 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 SLC10A3P09131 477 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 PDHBP11177 359 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 DNM1Q05193 864 aaKnown RBP16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 PKN1Q16512 942 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 FOXD4L6Q3SYB3 417 aaPredicted RBP16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 FOXD4L3Q6VB84 417 aaPredicted RBP16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 CLEC10AQ8IUN9 316 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 CDAN1Q8IWY9 1227 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 STAG2Q8N3U4 1231 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
CYB561A3-216ENST00000540755 XBP1P17861 261 aa16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 KRT85P78386 507 aa16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 ICA1Q05084 483 aa16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 SEPT2Q15019 361 aa16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 OTUD7BQ6GQQ9 843 aa16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 CNPY2Q9Y2B0 182 aa16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 V9GY48 417 aaPredicted RBP16.47■□□□□ 0.23
CYB561A3-216ENST00000540755 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 GH2P01242 217 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 EEF2P13639 858 aaKnown RBP16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 ZNF157P51786 506 aaPredicted RBP16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 SKOR2Q2VWA4 1001 aaPredicted RBP16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 DEFB129Q9H1M3 183 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 GJB4Q9NTQ9 266 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
CYB561A3-216ENST00000540755 USP17L5A8MUK1 530 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 KLRF2D3W0D1 207 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 MMP1P03956 469 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 PFKFB3Q16875 520 aaPredicted RBP16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 USP17L2Q6R6M4 530 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 RASAL3Q86YV0 1011 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 CCDC102AQ96A19 550 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 MTMR7Q9Y216 660 aa16.45■□□□□ 0.22
CYB561A3-216ENST00000540755 TRAK2O60296 914 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 SCG2P13521 617 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 CAP2P40123 477 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 JAG1P78504 1218 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 ATP2B2Q01814 1243 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 FAM173BQ6P4H8 233 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 MOB2Q70IA6 237 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 RASGRP2Q7LDG7 609 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 GINM1Q9NU53 330 aa16.44■□□□□ 0.22
CYB561A3-216ENST00000540755 DOCK1Q14185 1865 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 KIF28PB7ZC32 967 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 CYTH3O43739 400 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 GOLGA8HP0CJ92 632 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 U2AF2P26368 475 aaKnown RBP eCLIP16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 FKBP1BP68106 108 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 SAFBQ15424 915 aaKnown RBP eCLIP16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 PRAMEF18Q5VWM3 479 aa16.43■□□□□ 0.22
CYB561A3-216ENST00000540755 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 519.7 ms