RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 ZBED4O75132 1171 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
CDCA3-208ENST00000540683 PPARAQ07869 468 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 KCTD2Q14681 263 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 MCMDC2Q4G0Z9 681 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 UBE2Q1Q7Z7E8 422 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 SMC5Q8IY18 1101 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 MKL1Q969V6 931 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 BTBD7Q9P203 1132 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 DIS3Q9Y2L1 958 aaKnown RBP12.33□□□□□ -0.44
CDCA3-208ENST00000540683 MKI67P46013 3256 aaKnown RBP12.33□□□□□ -0.44
CDCA3-208ENST00000540683 M0R2C6 588 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 CNMDO75829 334 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 ERCC3P19447 782 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 OAZ1P54368 228 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 ALX1Q15699 326 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
CDCA3-208ENST00000540683 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 GMCL1P1Q8NEA9 526 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 MOV10L1Q9BXT6 1211 aaKnown RBP12.32□□□□□ -0.44
CDCA3-208ENST00000540683 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
CDCA3-208ENST00000540683 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 ZMYM6O95789 1325 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 SALL3Q9BXA9 1300 aa12.32□□□□□ -0.44
CDCA3-208ENST00000540683 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 F5H6K3 240 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 VWA5AO00534 786 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 SLC34A2O95436 690 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 ADORA2AP29274 412 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 STAT3P40763 770 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 KLRC3Q07444 240 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 CACNB2Q08289 660 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-208ENST00000540683 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 FAM160B2Q86V87 743 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 MMP19Q99542 508 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 C11orf49Q9H6J7 331 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 ANAPC4Q9UJX5 808 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 A0A0G2JMZ2 1700 aa12.31□□□□□ -0.44
CDCA3-208ENST00000540683 PLXNB2O15031 1838 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 A0A1W2PPC1 479 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 ATP2A1O14983 1001 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 CNGA1P29973 690 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 NUCB1Q02818 461 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 SIAH1Q8IUQ4 282 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
CDCA3-208ENST00000540683 ATG4CQ96DT6 458 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 PAWRQ96IZ0 340 aaKnown RBP12.3□□□□□ -0.44
CDCA3-208ENST00000540683 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
CDCA3-208ENST00000540683 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
CDCA3-208ENST00000540683 MYH4Q9Y623 1939 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 H0YGN5 161 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 ORC4O43929 436 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 STAT2P52630 851 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 TFAP4Q01664 338 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 HABP4Q5JVS0 413 aaKnown RBP12.29□□□□□ -0.44
CDCA3-208ENST00000540683 FAM83BQ5T0W9 1011 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 RILPL2Q969X0 211 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 CEP95Q96GE4 821 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 GMCL1Q96IK5 515 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 EPB41L4AQ9HCS5 686 aaPredicted RBP12.29□□□□□ -0.44
CDCA3-208ENST00000540683 DIAPH3Q9NSV4 1193 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
CDCA3-208ENST00000540683 CNPY2Q9Y2B0 182 aa12.29□□□□□ -0.44
CDCA3-208ENST00000540683 CEP290O15078 2479 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 SEPT4O43236 478 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 RANBP6O60518 1105 aaKnown RBP12.28□□□□□ -0.44
CDCA3-208ENST00000540683 PLA2G6O60733 806 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 NDUFB10O96000 172 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 CHGBP05060 677 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 BMP3P12645 472 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 SLC1A4P43007 532 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 EVX2Q03828 476 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 IKQ13123 557 aaPredicted RBP12.28□□□□□ -0.44
CDCA3-208ENST00000540683 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 TKFCQ3LXA3 575 aa12.28□□□□□ -0.44
CDCA3-208ENST00000540683 SLFN13Q68D06 897 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms