RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
C1R-206ENST00000540394 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
C1R-206ENST00000540394 PAPPA2Q9BXP8 1791 aa13.23□□□□□ -0.29
C1R-206ENST00000540394 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
C1R-206ENST00000540394 DEXIO95424 95 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 GH2P01242 217 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 CALM1P0DP23 149 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 CALM2P0DP24 149 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 CALM3P0DP25 149 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 SNHG28P0DPA3 235 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
C1R-206ENST00000540394 KIF4BQ2VIQ3 1234 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 GPKOWQ92917 476 aaPredicted RBP eCLIP13.22□□□□□ -0.29
C1R-206ENST00000540394 RBM28Q9NW13 759 aaKnown RBP13.22□□□□□ -0.29
C1R-206ENST00000540394 OTOFQ9HC10 1997 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 TTLL1O95922 423 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 MMP1P03956 469 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 TTBK2Q6IQ55 1244 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 FOXP4Q8IVH2 680 aaPredicted RBP13.22□□□□□ -0.29
C1R-206ENST00000540394 PGBD1Q96JS3 809 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 UBA5Q9GZZ9 404 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 RNF181Q9P0P0 153 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 ECE1P42892 770 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 FAM83AQ86UY5 434 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 GPC2Q8N158 579 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
C1R-206ENST00000540394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.22□□□□□ -0.29
C1R-206ENST00000540394 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 DOCK1Q14185 1865 aa13.22□□□□□ -0.29
C1R-206ENST00000540394 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
C1R-206ENST00000540394 U2AF2P26368 475 aaKnown RBP eCLIP13.21□□□□□ -0.29
C1R-206ENST00000540394 FKBP1CQ5VVH2 108 aa13.21□□□□□ -0.29
C1R-206ENST00000540394 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
C1R-206ENST00000540394 PARP14Q460N5 1801 aa13.21□□□□□ -0.29
C1R-206ENST00000540394 KLRF2D3W0D1 207 aa13.21□□□□□ -0.29
C1R-206ENST00000540394 ATP2B2Q01814 1243 aa13.21□□□□□ -0.29
C1R-206ENST00000540394 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
C1R-206ENST00000540394 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
C1R-206ENST00000540394 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.29
C1R-206ENST00000540394 DDX49Q9Y6V7 483 aaKnown RBP13.21□□□□□ -0.29
C1R-206ENST00000540394 NT5C2P49902 561 aa13.21□□□□□ -0.3
C1R-206ENST00000540394 TOB1P50616 345 aaPredicted RBP13.21□□□□□ -0.3
C1R-206ENST00000540394 PPP2R5BQ15173 497 aa13.21□□□□□ -0.3
C1R-206ENST00000540394 KLHL40Q2TBA0 621 aa13.21□□□□□ -0.3
C1R-206ENST00000540394 KCTD1Q719H9 257 aa13.21□□□□□ -0.3
C1R-206ENST00000540394 ZBTB9Q96C00 473 aa13.21□□□□□ -0.3
C1R-206ENST00000540394 ABCB5Q2M3G0 1257 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 ANGEL2Q5VTE6 544 aaKnown RBP13.2□□□□□ -0.3
C1R-206ENST00000540394 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 CPLX2Q6PUV4 134 aaKnown RBP13.2□□□□□ -0.3
C1R-206ENST00000540394 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 NUP88Q99567 741 aaPredicted RBP13.2□□□□□ -0.3
C1R-206ENST00000540394 TMOD2Q9NZR1 351 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 MAP3K10Q02779 954 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 DGKZQ13574 1117 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
C1R-206ENST00000540394 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
C1R-206ENST00000540394 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 ACER1Q8TDN7 264 aa13.2□□□□□ -0.3
C1R-206ENST00000540394 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
C1R-206ENST00000540394 SLC16A2P36021 539 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 DIS3L2Q8IYB7 885 aaKnown RBP13.19□□□□□ -0.3
C1R-206ENST00000540394 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 MYO1BO43795 1136 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 KRT85P78386 507 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 CAVIN1Q6NZI2 390 aaKnown RBP13.19□□□□□ -0.3
C1R-206ENST00000540394 TNFRSF25Q93038 417 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 HERC5Q9UII4 1024 aaKnown RBP13.19□□□□□ -0.3
C1R-206ENST00000540394 SCG2P13521 617 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 MKL1Q969V6 931 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 GPCPD1Q9NPB8 672 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 ATP6V1DQ9Y5K8 247 aa13.19□□□□□ -0.3
C1R-206ENST00000540394 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
C1R-206ENST00000540394 ICA1Q05084 483 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 CCDC178Q5BJE1 867 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 TMEM179Q6ZVK1 233 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
C1R-206ENST00000540394 KIF5BP33176 963 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 GSE1Q14687 1217 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 PIGSQ96S52 555 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 RRAGDQ9NQL2 400 aaPredicted RBP13.18□□□□□ -0.3
C1R-206ENST00000540394 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 ZNF543Q08ER8 600 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 HOMER1Q86YM7 354 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 SPICE1Q8N0Z3 855 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 SPATA32Q96LK8 384 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 PDCL3Q9H2J4 239 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 MRVI1Q9Y6F6 885 aa13.18□□□□□ -0.3
C1R-206ENST00000540394 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 TBC1D12O60347 775 aa13.17□□□□□ -0.3
C1R-206ENST00000540394 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms