RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 NF2P35240 595 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 SOX10P56693 466 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 PTH1RQ03431 593 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 LRMPQ12912 555 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 Q3C1V9 767 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 TEX35Q5T0J7 233 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 FBXO46Q6PJ61 603 aaPredicted RBP8.82□□□□□ -1
CCDC60-204ENST00000539847 FCHSD1Q86WN1 690 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 ANKRD18AQ8IVF6 992 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 OGFOD1Q8N543 542 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 MSL3Q8N5Y2 521 aaKnown RBP8.82□□□□□ -1
CCDC60-204ENST00000539847 PNMA1Q8ND90 353 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 SMARCC2Q8TAQ2 1214 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 DNAAF4Q8WXU2 420 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 PGBD1Q96JS3 809 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 ZNF396Q96N95 335 aaPredicted RBP8.82□□□□□ -1
CCDC60-204ENST00000539847 CDC5LQ99459 802 aaKnown RBP8.82□□□□□ -1
CCDC60-204ENST00000539847 IL1RAPL2Q9NP60 686 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 NRBP1Q9UHY1 535 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 HDAC9Q9UKV0 1011 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 POLR2AP24928 1970 aaKnown RBP8.82□□□□□ -1
CCDC60-204ENST00000539847 MED23Q9ULK4 1368 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 UTYO14607 1347 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 CACNA1FO60840 1977 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 SCN9AQ15858 1988 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 A0A1W2PQ27 194 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 A0A1W2PQ64 194 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 A0A1W2PQD8 194 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 BECN2A8MW95 431 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 DDX58O95786 925 aaKnown RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 IFIT2P09913 472 aaKnown RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 INHBEP58166 350 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 TPM4P67936 248 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -1
CCDC60-204ENST00000539847 CCZ1BP86790 482 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 CCZ1P86791 482 aaPredicted RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 ADCK5Q3MIX3 580 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 MUM1L1Q5H9M0 696 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 STRIP1Q5VSL9 837 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 LYPD8Q6UX82 237 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 CEP57L1Q8IYX8 460 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 FBXL16Q8N461 479 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 ENGASEQ8NFI3 743 aa8.81□□□□□ -1
CCDC60-204ENST00000539847 ZNF296Q8WUU4 475 aaPredicted RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 BSDC1Q9NW68 430 aaPredicted RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 ARGLU1Q9NWB6 273 aaPredicted RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 CWC25Q9NXE8 425 aaPredicted RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 ZNF215Q9UL58 517 aaPredicted RBP8.81□□□□□ -1
CCDC60-204ENST00000539847 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
CCDC60-204ENST00000539847 CCDC69A6NI79 296 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 GPR25O00155 361 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 HRO43593 1189 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 NR1I2O75469 434 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 FAM160A1Q05DH4 1040 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 CAMK4Q16566 473 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 CCDC144BQ3MJ40 725 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 DACT2Q5SW24 774 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 DESI1Q6ICB0 168 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 ARMC9Q7Z3E5 817 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 APOBEC3FQ8IUX4 373 aaKnown RBP8.8□□□□□ -1
CCDC60-204ENST00000539847 CCDC144CPQ8IYA2 1237 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 CKAP2LQ8IYA6 745 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 GTF3C6Q969F1 213 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 NOL10Q9BSC4 688 aaKnown RBP8.8□□□□□ -1
CCDC60-204ENST00000539847 METTL22Q9BUU2 404 aaPredicted RBP8.8□□□□□ -1
CCDC60-204ENST00000539847 UBXN6Q9BZV1 441 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 COA1Q9GZY4 146 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 DNAJC25Q9H1X3 360 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 SEC31BQ9NQW1 1179 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 PSD3Q9NYI0 1048 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 COL1A1P02452 1464 aaPredicted RBP8.8□□□□□ -1
CCDC60-204ENST00000539847 TAF1P21675 1872 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 PSME4Q14997 1843 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 PHLPP2Q6ZVD8 1323 aa8.8□□□□□ -1
CCDC60-204ENST00000539847 GOLGA6L9A6NEM1 432 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 WNT10BO00744 389 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 PFKFB2O60825 505 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 FKTNO75072 461 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 ZRANB2O95218 330 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC60-204ENST00000539847 ADD1P35611 737 aaKnown RBP8.79□□□□□ -1
CCDC60-204ENST00000539847 KCNJ4P48050 445 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 BCAMP50895 628 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 CTSWP56202 376 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 PPP4CP60510 307 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 GPS2Q13227 327 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 TOB2Q14106 344 aaPredicted RBP8.79□□□□□ -1
CCDC60-204ENST00000539847 LDLRAD1Q5T700 205 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 JAKMIP3Q5VZ66 844 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 FBXO38Q6PIJ6 1188 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 BRICD5Q6PL45 260 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 CCDC73Q6ZRK6 1079 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 SCUBE3Q8IX30 993 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 TXLNBQ8N3L3 684 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 NECAB1Q8N987 351 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 BICD2Q8TD16 824 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 USB1Q9BQ65 265 aaKnown RBP8.79□□□□□ -1
CCDC60-204ENST00000539847 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.79□□□□□ -1
CCDC60-204ENST00000539847 LEMD3Q9Y2U8 911 aa8.79□□□□□ -1
CCDC60-204ENST00000539847 PPP2R3BQ9Y5P8 575 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms