RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 GGA3Q9NZ52 723 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 BAZ2BQ9UIF8 2168 aaKnown RBP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 UNC80Q8N2C7 3258 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 MPHOSPH10O00566 681 aaKnown RBP10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 PLEKHA8P1O95397 391 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 TNNI2P48788 182 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 MAP3K10Q02779 954 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 SLC35G1Q2M3R5 365 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 FANCBQ8NB91 859 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 CHAMP1Q96JM3 812 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 CCDC17Q96LX7 622 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 LLPHQ9BRT6 129 aaKnown RBP10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 DEFB129Q9H1M3 183 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 MTMR4Q9NYA4 1195 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 CIZ1Q9ULV3 898 aaPredicted RBP10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 FZD1Q9UP38 647 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 PTPN22Q9Y2R2 807 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 TCHHQ07283 1943 aa10.7□□□□□ -0.7
RTN4IP1-204ENST00000539449 TBC1D12O60347 775 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 SYT1P21579 422 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 NT5C2P49902 561 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 FUT2Q10981 343 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 RAB3GAP1Q15042 981 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 RTN1Q16799 776 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 ABCB5Q2M3G0 1257 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 SYNE3Q6ZMZ3 975 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 MOB2Q70IA6 237 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 CATIPQ7Z7H3 387 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 NBPF11Q86T75 865 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 CCDC84Q86UT8 332 aaPredicted RBP10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 LRRC47Q8N1G4 583 aaKnown RBP10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 STAG2Q8N3U4 1231 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 PNMA1Q8ND90 353 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 PHKBQ93100 1093 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 AIFM3Q96NN9 605 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 PRO3102Q9H379 93 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 KAT14Q9H8E8 782 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 GJB4Q9NTQ9 266 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 CLIP2Q9UDT6 1046 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 HERC5Q9UII4 1024 aaKnown RBP10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 STX8Q9UNK0 236 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 SSC5DA1L4H1 1573 aa10.69□□□□□ -0.7
RTN4IP1-204ENST00000539449 PHF20L1A8MW92 1017 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 DDAH1O94760 285 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 BRD1O95696 1058 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 GH2P01242 217 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 EEF2P13639 858 aaKnown RBP10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 SREBF2Q12772 1141 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 MKRN3Q13064 507 aaKnown RBP10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 GRM4Q14833 912 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 CCDC178Q5BJE1 867 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 OTUD7BQ6GQQ9 843 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 APOBEC3FQ8IUX4 373 aaKnown RBP10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 SRBD1Q8N5C6 995 aaKnown RBP10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 TNPO1Q92973 898 aaKnown RBP10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 CPVLQ9H3G5 476 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 ORC3Q9UBD5 711 aaPredicted RBP10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 MTMR6Q9Y217 621 aa10.68□□□□□ -0.7
RTN4IP1-204ENST00000539449 hCG_1642624A0A1W2PR95 340 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 A0A1W2PRG0 241 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 SOX1O00570 391 aaPredicted RBP10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 GOLGA8HP0CJ92 632 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 IFNAR1P17181 557 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 FXR2P51116 673 aaKnown RBP eCLIP10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 RCAN1P53805 252 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 ATP2B2Q01814 1243 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 TNFAIP1Q13829 316 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 LARP1BQ659C4 914 aaKnown RBP10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 TMTC3Q6ZXV5 915 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 ACER1Q8TDN7 264 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 SHISA4Q96DD7 197 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 SLC26A6Q9BXS9 759 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 MAD2L2Q9UI95 211 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 DOCK1Q14185 1865 aa10.67□□□□□ -0.7
RTN4IP1-204ENST00000539449 MYH15Q9Y2K3 1946 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 CNTNAP5Q8WYK1 1306 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 PHIPQ8WWQ0 1821 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 LAMA3Q16787 3333 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 CPLX1O14810 134 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 STX6O43752 255 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 TTLL1O95922 423 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 CALM1P0DP23 149 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 CALM2P0DP24 149 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 CALM3P0DP25 149 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 INPP5BP32019 993 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 CAP2P40123 477 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 NUCB2P80303 420 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 GUCY1B3Q02153 619 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 KIAA1755Q5JYT7 1200 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 USP17L2Q6R6M4 530 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 TMEM179Q6ZVK1 233 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 MKL1Q969V6 931 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms