RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 STRNO43815 780 aa26.48■■□□□ 1.83
SCARB1-206ENST00000539320 PRDM1O75626 825 aa26.48■■□□□ 1.83
SCARB1-206ENST00000539320 MNX1P50219 401 aaPredicted RBP26.48■■□□□ 1.83
SCARB1-206ENST00000539320 CHRDL2Q6WN34 429 aa26.48■■□□□ 1.83
SCARB1-206ENST00000539320 NCAPG2Q86XI2 1143 aa26.48■■□□□ 1.83
SCARB1-206ENST00000539320 MROH8Q9H579 483 aa26.48■■□□□ 1.83
SCARB1-206ENST00000539320 PPP1R9AQ9ULJ8 1098 aa26.48■■□□□ 1.83
SCARB1-206ENST00000539320 PLIN4Q96Q06 1357 aa26.47■■□□□ 1.83
SCARB1-206ENST00000539320 IGKV6D-41A0A0C4DH26 115 aa26.47■■□□□ 1.83
SCARB1-206ENST00000539320 PDE1AP54750 535 aa26.47■■□□□ 1.83
SCARB1-206ENST00000539320 TMEM132BQ14DG7 1078 aa26.47■■□□□ 1.83
SCARB1-206ENST00000539320 DPP9Q86TI2 863 aa26.47■■□□□ 1.83
SCARB1-206ENST00000539320 ZNF444Q8N0Y2 327 aaPredicted RBP26.47■■□□□ 1.83
SCARB1-206ENST00000539320 C11orf49Q9H6J7 331 aa26.47■■□□□ 1.83
SCARB1-206ENST00000539320 ADAMTS5Q9UNA0 930 aa26.47■■□□□ 1.83
SCARB1-206ENST00000539320 COL11A1P12107 1806 aaPredicted RBP26.46■■□□□ 1.83
SCARB1-206ENST00000539320 ABRAQ8N0Z2 381 aa26.46■■□□□ 1.83
SCARB1-206ENST00000539320 EVI5LQ96CN4 794 aa26.46■■□□□ 1.83
SCARB1-206ENST00000539320 FRMPD3Q5JV73 1810 aa26.46■■□□□ 1.83
SCARB1-206ENST00000539320 MYH4Q9Y623 1939 aa26.45■■□□□ 1.83
SCARB1-206ENST00000539320 SLC25A27O95847 323 aa26.45■■□□□ 1.82
SCARB1-206ENST00000539320 NDUFB10O96000 172 aa26.45■■□□□ 1.82
SCARB1-206ENST00000539320 SLC3A2P08195 630 aaKnown RBP26.45■■□□□ 1.82
SCARB1-206ENST00000539320 OLFML2BQ68BL8 750 aa26.45■■□□□ 1.82
SCARB1-206ENST00000539320 LHX8Q68G74 356 aa26.45■■□□□ 1.82
SCARB1-206ENST00000539320 CCDC129Q6ZRS4 1044 aa26.45■■□□□ 1.82
SCARB1-206ENST00000539320 VWA5AO00534 786 aa26.44■■□□□ 1.82
SCARB1-206ENST00000539320 CYP2C19P33261 490 aa26.44■■□□□ 1.82
SCARB1-206ENST00000539320 PDE4BQ07343 736 aa26.44■■□□□ 1.82
SCARB1-206ENST00000539320 PPARAQ07869 468 aa26.44■■□□□ 1.82
SCARB1-206ENST00000539320 CEP95Q96GE4 821 aa26.44■■□□□ 1.82
SCARB1-206ENST00000539320 NUP88Q99567 741 aaPredicted RBP26.44■■□□□ 1.82
SCARB1-206ENST00000539320 SLC5A4Q9NY91 659 aa26.44■■□□□ 1.82
SCARB1-206ENST00000539320 F5H6K3 240 aa26.43■■□□□ 1.82
SCARB1-206ENST00000539320 IGHA2P01877 340 aa26.43■■□□□ 1.82
SCARB1-206ENST00000539320 KLRC3Q07444 240 aa26.43■■□□□ 1.82
SCARB1-206ENST00000539320 RIOX2Q8IUF8 465 aa26.43■■□□□ 1.82
SCARB1-206ENST00000539320 SLF1Q9BQI6 1058 aa26.43■■□□□ 1.82
SCARB1-206ENST00000539320 LNPKQ9C0E8 428 aa26.43■■□□□ 1.82
SCARB1-206ENST00000539320 CLIP2Q9UDT6 1046 aa26.43■■□□□ 1.82
SCARB1-206ENST00000539320 PFASO15067 1338 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 FOXP2O15409 715 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 MSCO60682 206 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 COBLO75128 1261 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 CYBAP13498 195 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 COPB2P35606 906 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 FXR1P51114 621 aaKnown RBP eCLIP26.42■■□□□ 1.82
SCARB1-206ENST00000539320 REPS2Q8NFH8 660 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 MTMR4Q9NYA4 1195 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 DDX20Q9UHI6 824 aaKnown RBP26.42■■□□□ 1.82
SCARB1-206ENST00000539320 ZNF214Q9UL59 606 aaPredicted RBP26.42■■□□□ 1.82
SCARB1-206ENST00000539320 SYNPO2Q9UMS6 1093 aa26.42■■□□□ 1.82
SCARB1-206ENST00000539320 TTLL1O95922 423 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 TSPY3P0CV98 308 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 TSPY8P0CW00 308 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 FCER1AP12319 257 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 CNGA1P29973 690 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 SMC5Q8IY18 1101 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 C7orf61Q8IZ16 206 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 TRPV1Q8NER1 839 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 NEDD1Q8NHV4 660 aa26.41■■□□□ 1.82
SCARB1-206ENST00000539320 RWDD1Q9H446 243 aaPredicted RBP26.41■■□□□ 1.82
SCARB1-206ENST00000539320 COL6A1P12109 1028 aa26.4■■□□□ 1.82
SCARB1-206ENST00000539320 STAT3P40763 770 aa26.4■■□□□ 1.82
SCARB1-206ENST00000539320 LRRC47Q8N1G4 583 aaKnown RBP26.4■■□□□ 1.82
SCARB1-206ENST00000539320 MKL1Q969V6 931 aa26.4■■□□□ 1.82
SCARB1-206ENST00000539320 MMP19Q99542 508 aa26.4■■□□□ 1.82
SCARB1-206ENST00000539320 HELLSQ9NRZ9 838 aa26.4■■□□□ 1.82
SCARB1-206ENST00000539320 RBM27Q9P2N5 1060 aaKnown RBP26.4■■□□□ 1.82
SCARB1-206ENST00000539320 FAM47AQ5JRC9 791 aa26.39■■□□□ 1.82
SCARB1-206ENST00000539320 PRO3102Q9H379 93 aa26.39■■□□□ 1.82
SCARB1-206ENST00000539320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.39■■□□□ 1.821e-7■■■■□ 24.4
SCARB1-206ENST00000539320 TFAP4Q01664 338 aa26.38■■□□□ 1.81
SCARB1-206ENST00000539320 KCTD2Q14681 263 aa26.38■■□□□ 1.81
SCARB1-206ENST00000539320 VPS53Q5VIR6 699 aa26.38■■□□□ 1.81
SCARB1-206ENST00000539320 GMCL1P1Q8NEA9 526 aa26.38■■□□□ 1.81
SCARB1-206ENST00000539320 MAML3Q96JK9 1138 aa26.38■■□□□ 1.81
SCARB1-206ENST00000539320 TEX13BQ9BXU2 312 aa26.38■■□□□ 1.81
SCARB1-206ENST00000539320 RANBP2P49792 3224 aaKnown RBP26.38■■□□□ 1.81
SCARB1-206ENST00000539320 A0A0D9SFI3 127 aa26.37■■□□□ 1.81
SCARB1-206ENST00000539320 TICAM2Q86XR7 235 aa26.37■■□□□ 1.81
SCARB1-206ENST00000539320 PRPF38AQ8NAV1 312 aaKnown RBP26.37■■□□□ 1.81
SCARB1-206ENST00000539320 EXOC6Q8TAG9 804 aa26.37■■□□□ 1.81
SCARB1-206ENST00000539320 ZNFX1Q9P2E3 1918 aaKnown RBP26.36■■□□□ 1.81
SCARB1-206ENST00000539320 CTDSPL2Q05D32 466 aa26.36■■□□□ 1.81
SCARB1-206ENST00000539320 PPP4R3BQ5MIZ7 849 aa26.36■■□□□ 1.81
SCARB1-206ENST00000539320 B4GALNT3Q6L9W6 998 aa26.36■■□□□ 1.81
SCARB1-206ENST00000539320 FAM227BQ96M60 508 aa26.36■■□□□ 1.81
SCARB1-206ENST00000539320 FEM1BQ9UK73 627 aa26.36■■□□□ 1.81
SCARB1-206ENST00000539320 ZMYND8Q9ULU4 1186 aaPredicted RBP26.36■■□□□ 1.81
SCARB1-206ENST00000539320 SLFN13Q68D06 897 aa26.35■■□□□ 1.81
SCARB1-206ENST00000539320 SNRNP48Q6IEG0 339 aaKnown RBP26.35■■□□□ 1.81
SCARB1-206ENST00000539320 KIFC2Q96AC6 838 aa26.35■■□□□ 1.81
SCARB1-206ENST00000539320 ANAPC4Q9UJX5 808 aa26.35■■□□□ 1.81
SCARB1-206ENST00000539320 CTDP1Q9Y5B0 961 aaPredicted RBP26.35■■□□□ 1.81
SCARB1-206ENST00000539320 TSPY2A6NKD2 308 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 TRIM6-TRIM34B2RNG4 842 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 SEPT4O43236 478 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 ZBED4O75132 1171 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 PGK2P07205 417 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms