RNA–Protein interactions for RNA: ENST00000538354.5

TULP3-203, Transcript of tubby like protein 3, humanhuman

TSL 1 (best)

Gene TULP3, Length 1,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-203ENST00000538354 HOXC6P09630 235 aa23.34■■□□□ 1.33
TULP3-203ENST00000538354 DPP9Q86TI2 863 aa23.34■■□□□ 1.33
TULP3-203ENST00000538354 NCAPG2Q86XI2 1143 aa23.34■■□□□ 1.33
TULP3-203ENST00000538354 EVI5LQ96CN4 794 aa23.34■■□□□ 1.33
TULP3-203ENST00000538354 FSD1Q9BTV5 496 aa23.34■■□□□ 1.33
TULP3-203ENST00000538354 SH2D4AQ9H788 454 aa23.34■■□□□ 1.33
TULP3-203ENST00000538354 MINDY4BA8MYZ0 360 aa23.33■■□□□ 1.33
TULP3-203ENST00000538354 M0R2C6 588 aa23.33■■□□□ 1.33
TULP3-203ENST00000538354 SOX1O00570 391 aaPredicted RBP23.33■■□□□ 1.33
TULP3-203ENST00000538354 WDR46O15213 610 aaKnown RBP23.33■■□□□ 1.33
TULP3-203ENST00000538354 COBLO75128 1261 aa23.33■■□□□ 1.33
TULP3-203ENST00000538354 COL6A1P12109 1028 aa23.33■■□□□ 1.33
TULP3-203ENST00000538354 TICAM2Q86XR7 235 aa23.33■■□□□ 1.33
TULP3-203ENST00000538354 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.33■■□□□ 1.33
TULP3-203ENST00000538354 ARPP21Q9UBL0 812 aaPredicted RBP23.33■■□□□ 1.33
TULP3-203ENST00000538354 GREB1LQ9C091 1923 aaPredicted RBP23.33■■□□□ 1.32
TULP3-203ENST00000538354 ZNFX1Q9P2E3 1918 aaKnown RBP23.33■■□□□ 1.32
TULP3-203ENST00000538354 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
TULP3-203ENST00000538354 LRRC26Q2I0M4 334 aa23.32■■□□□ 1.32
TULP3-203ENST00000538354 SHCBP1Q8NEM2 672 aa23.32■■□□□ 1.32
TULP3-203ENST00000538354 KANSL2Q9H9L4 492 aa23.32■■□□□ 1.32
TULP3-203ENST00000538354 EPB41L4AQ9HCS5 686 aaPredicted RBP23.32■■□□□ 1.32
TULP3-203ENST00000538354 DDX20Q9UHI6 824 aaKnown RBP23.32■■□□□ 1.32
TULP3-203ENST00000538354 RASA1P20936 1047 aa23.31■■□□□ 1.32
TULP3-203ENST00000538354 TMEM132BQ14DG7 1078 aa23.31■■□□□ 1.32
TULP3-203ENST00000538354 FAM83BQ5T0W9 1011 aa23.31■■□□□ 1.32
TULP3-203ENST00000538354 ANO1Q5XXA6 986 aa23.31■■□□□ 1.32
TULP3-203ENST00000538354 MB21D1Q8N884 522 aa23.31■■□□□ 1.32
TULP3-203ENST00000538354 GDF15Q99988 308 aa23.31■■□□□ 1.32
TULP3-203ENST00000538354 GPAA1O43292 621 aa23.3■■□□□ 1.32
TULP3-203ENST00000538354 IGHA2P01877 340 aa23.3■■□□□ 1.32
TULP3-203ENST00000538354 CYBAP13498 195 aa23.3■■□□□ 1.32
TULP3-203ENST00000538354 SBK1Q52WX2 424 aa23.3■■□□□ 1.32
TULP3-203ENST00000538354 SEC62Q99442 399 aaKnown RBP23.3■■□□□ 1.32
TULP3-203ENST00000538354 NUP88Q99567 741 aaPredicted RBP23.3■■□□□ 1.32
TULP3-203ENST00000538354 STRNO43815 780 aa23.29■■□□□ 1.32
TULP3-203ENST00000538354 PDE4AP27815 886 aa23.29■■□□□ 1.32
TULP3-203ENST00000538354 MAGEA10P43363 369 aaPredicted RBP23.29■■□□□ 1.32
TULP3-203ENST00000538354 ZMYM1Q5SVZ6 1142 aa23.29■■□□□ 1.32
TULP3-203ENST00000538354 PRAMEF19Q5SWL8 479 aa23.29■■□□□ 1.32
TULP3-203ENST00000538354 LRCH3Q96II8 777 aa23.29■■□□□ 1.32
TULP3-203ENST00000538354 SENP6Q9GZR1 1112 aaPredicted RBP23.29■■□□□ 1.32
TULP3-203ENST00000538354 GOPCQ9HD26 462 aa23.29■■□□□ 1.32
TULP3-203ENST00000538354 PRDM1O75626 825 aa23.28■■□□□ 1.32
TULP3-203ENST00000538354 MROH8Q9H579 483 aa23.28■■□□□ 1.32
TULP3-203ENST00000538354 MKNK2Q9HBH9 465 aa23.28■■□□□ 1.32
TULP3-203ENST00000538354 MYH4Q9Y623 1939 aa23.27■■□□□ 1.32
TULP3-203ENST00000538354 APPP05067 770 aa23.27■■□□□ 1.32
TULP3-203ENST00000538354 TDO2P48775 406 aa23.27■■□□□ 1.32
TULP3-203ENST00000538354 ATN1P54259 1190 aaPredicted RBP23.27■■□□□ 1.32
TULP3-203ENST00000538354 OLFML2BQ68BL8 750 aa23.27■■□□□ 1.32
TULP3-203ENST00000538354 PPP1R9AQ9ULJ8 1098 aa23.27■■□□□ 1.32
TULP3-203ENST00000538354 ADAMTS5Q9UNA0 930 aa23.27■■□□□ 1.32
TULP3-203ENST00000538354 ROBO3Q96MS0 1386 aa23.27■■□□□ 1.31
TULP3-203ENST00000538354 TRIM6-TRIM34B2RNG4 842 aa23.26■■□□□ 1.31
TULP3-203ENST00000538354 GNAT2P19087 354 aa23.26■■□□□ 1.31
TULP3-203ENST00000538354 GJC2Q5T442 439 aaPredicted RBP23.26■■□□□ 1.31
TULP3-203ENST00000538354 GIMAP6Q6P9H5 292 aa23.26■■□□□ 1.31
TULP3-203ENST00000538354 PLXNA1Q9UIW2 1896 aa23.26■■□□□ 1.31
TULP3-203ENST00000538354 A0A1W2PPC1 479 aa23.25■■□□□ 1.31
TULP3-203ENST00000538354 VWA5AO00534 786 aa23.25■■□□□ 1.31
TULP3-203ENST00000538354 MYCNP04198 464 aaPredicted RBP23.25■■□□□ 1.31
TULP3-203ENST00000538354 NEFLP07196 543 aa23.25■■□□□ 1.31
TULP3-203ENST00000538354 PGK2P07205 417 aa23.25■■□□□ 1.31
TULP3-203ENST00000538354 FCER1AP12319 257 aa23.25■■□□□ 1.31
TULP3-203ENST00000538354 CENPQQ7L2Z9 268 aaPredicted RBP23.25■■□□□ 1.31
TULP3-203ENST00000538354 MAML3Q96JK9 1138 aa23.25■■□□□ 1.31
TULP3-203ENST00000538354 DNAH12Q6ZR08 3092 aa23.25■■□□□ 1.31
TULP3-203ENST00000538354 MSCO60682 206 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 BMP8BP34820 402 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 STAT3P40763 770 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 RIOX2Q8IUF8 465 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 REPS2Q8NFH8 660 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 MMP19Q99542 508 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 CLIP2Q9UDT6 1046 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 SMCHD1A6NHR9 2005 aa23.24■■□□□ 1.31
TULP3-203ENST00000538354 F5H6K3 240 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 SLC25A27O95847 323 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 NDUFB10O96000 172 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 MDM2Q00987 491 aaPredicted RBP23.23■■□□□ 1.31
TULP3-203ENST00000538354 KLRC3Q07444 240 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 IFNL3Q8IZI9 196 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 ABRAQ8N0Z2 381 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 RILPL2Q969X0 211 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 SLC5A4Q9NY91 659 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 NYAP2Q9P242 653 aa23.23■■□□□ 1.31
TULP3-203ENST00000538354 ZNF214Q9UL59 606 aaPredicted RBP23.23■■□□□ 1.31
TULP3-203ENST00000538354 IGKV6D-41A0A0C4DH26 115 aa23.22■■□□□ 1.31
TULP3-203ENST00000538354 PATL2C9JE40 543 aaKnown RBP23.22■■□□□ 1.31
TULP3-203ENST00000538354 DNM1LO00429 736 aa23.22■■□□□ 1.31
TULP3-203ENST00000538354 SLC4A3P48751 1232 aa23.22■■□□□ 1.31
TULP3-203ENST00000538354 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
TULP3-203ENST00000538354 UBE2OQ9C0C9 1292 aaKnown RBP23.22■■□□□ 1.31
TULP3-203ENST00000538354 HELLSQ9NRZ9 838 aa23.22■■□□□ 1.31
TULP3-203ENST00000538354 SEPT4O43236 478 aa23.21■■□□□ 1.31
TULP3-203ENST00000538354 CCDC129Q6ZRS4 1044 aa23.21■■□□□ 1.31
TULP3-203ENST00000538354 ZNF444Q8N0Y2 327 aaPredicted RBP23.21■■□□□ 1.31
TULP3-203ENST00000538354 LRRC47Q8N1G4 583 aaKnown RBP23.21■■□□□ 1.31
TULP3-203ENST00000538354 CHMP4CQ96CF2 233 aa23.21■■□□□ 1.31
TULP3-203ENST00000538354 CEP95Q96GE4 821 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms