RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 USP17L17D6RBQ6 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 USP17L19D6RCP7 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 USP17L20D6RJB6 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 SH2B2O14492 632 aaPredicted RBP15.41■□□□□ 0.06
CHFR-216ENST00000538235 PRC1O43663 620 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 RAD21O60216 631 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 REC8O95072 547 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 PDHBP11177 359 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
CHFR-216ENST00000538235 MCCP23508 829 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 EXOSC10Q01780 885 aaKnown RBP15.41■□□□□ 0.06
CHFR-216ENST00000538235 USP17L24Q0WX57 530 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 Q3C1V9 767 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 KCTD1Q719H9 257 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 ANKRD13CQ8N6S4 541 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 LPAR1Q92633 364 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 TANGO6Q9C0B7 1094 aa15.41■□□□□ 0.06
CHFR-216ENST00000538235 LRRC37A2A6NM11 1700 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 DSG3P32926 999 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 IRX3P78415 501 aaPredicted RBP15.4■□□□□ 0.06
CHFR-216ENST00000538235 NOM1Q5C9Z4 860 aaKnown RBP15.4■□□□□ 0.06
CHFR-216ENST00000538235 LBX2Q6XYB7 198 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 DGKHQ86XP1 1220 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 GMCL1Q96IK5 515 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 MYL10Q9BUA6 226 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 BEGAINQ9BUH8 593 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 PORCNQ9H237 461 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 SH2D4AQ9H788 454 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 GOPCQ9HD26 462 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 MORF4L1Q9UBU8 362 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 SYNPO2Q9UMS6 1093 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 ADAMTS5Q9UNA0 930 aa15.4■□□□□ 0.06
CHFR-216ENST00000538235 CENPFP49454 3210 aa15.39■□□□□ 0.06
CHFR-216ENST00000538235 MCM3APO60318 1980 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 FLOT1O75955 427 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 GOLGA8HP0CJ92 632 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 SNAP25P60880 206 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 COL13A1Q5TAT6 717 aaPredicted RBP15.39■□□□□ 0.05
CHFR-216ENST00000538235 OTUD7BQ6GQQ9 843 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 RALYLQ86SE5 291 aaKnown RBP15.39■□□□□ 0.05
CHFR-216ENST00000538235 STAG2Q8N3U4 1231 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 PNMA1Q8ND90 353 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 JAKMIP1Q96N16 626 aaKnown RBP15.39■□□□□ 0.05
CHFR-216ENST00000538235 NEK1Q96PY6 1258 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 PAGR1Q9BTK6 254 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
CHFR-216ENST00000538235 IFIT3O14879 490 aaKnown RBP15.38■□□□□ 0.05
CHFR-216ENST00000538235 FKTNO75072 461 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 BMP3P12645 472 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 OSBPP22059 807 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 SLC16A2P36021 539 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 LACTBP83111 547 aaPredicted RBP15.38■□□□□ 0.05
CHFR-216ENST00000538235 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
CHFR-216ENST00000538235 SMCR8Q8TEV9 937 aaPredicted RBP15.38■□□□□ 0.05
CHFR-216ENST00000538235 TRIM47Q96LD4 638 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 TTC14Q96N46 770 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 KIF2CQ99661 725 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 PNMA3Q9UL41 463 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
CHFR-216ENST00000538235 BRPF3Q9ULD4 1205 aa15.38■□□□□ 0.05
CHFR-216ENST00000538235 TMEM232C9JQI7 657 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
CHFR-216ENST00000538235 RXRAP19793 462 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 ERVK-24P63145 666 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 SP3Q02447 781 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 ZNF543Q08ER8 600 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 TROAPQ12815 778 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 NBPF11Q86T75 865 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 IQCA1Q86XH1 822 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 IL17RAQ96F46 866 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 GPCPD1Q9NPB8 672 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 FRMPD3Q5JV73 1810 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 ZNF536O15090 1300 aa15.37■□□□□ 0.05
CHFR-216ENST00000538235 VWA5AO00534 786 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 SLC1A4P43007 532 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 TRDNQ13061 729 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 PABPC4Q13310 644 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHFR-216ENST00000538235 COG2Q14746 738 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 CCDC96Q2M329 555 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 IFIT1BQ5T764 474 aaKnown RBP15.36■□□□□ 0.05
CHFR-216ENST00000538235 RNF20Q5VTR2 975 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 DCAF4Q8WV16 495 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 SLF1Q9BQI6 1058 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 UPF3BQ9BZI7 483 aaKnown RBP15.36■□□□□ 0.05
CHFR-216ENST00000538235 EFCC1Q9HA90 598 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 RIPK3Q9Y572 518 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 MYPNQ86TC9 1320 aa15.36■□□□□ 0.05
CHFR-216ENST00000538235 RPS6KB1P23443 525 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 MCM5P33992 734 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 NT5C2P49902 561 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 TOB2Q14106 344 aaPredicted RBP15.35■□□□□ 0.05
CHFR-216ENST00000538235 GRM4Q14833 912 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms