RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
SPARC-207ENST00000537849 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 WASF1Q92558 559 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 SHISA4Q96DD7 197 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 CDCA5Q96FF9 252 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 GMCL1Q96IK5 515 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 C8orf76Q96K31 380 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 PHIPQ8WWQ0 1821 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 DOCK1Q14185 1865 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 H3BQV1 296 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 FOSBP53539 338 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
SPARC-207ENST00000537849 RESTQ13127 1097 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 GPATCH4Q5T3I0 446 aaKnown RBP13.58□□□□□ -0.24
SPARC-207ENST00000537849 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 KRT40Q6A162 431 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.58□□□□□ -0.24
SPARC-207ENST00000537849 KCTD1Q719H9 257 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPARC-207ENST00000537849 WRNIP1Q96S55 665 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 WDR18Q9BV38 432 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
SPARC-207ENST00000537849 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
SPARC-207ENST00000537849 PPP1R12BO60237 982 aaPredicted RBP13.57□□□□□ -0.24
SPARC-207ENST00000537849 BAG4O95429 457 aaKnown RBP13.57□□□□□ -0.24
SPARC-207ENST00000537849 PTPRAP18433 802 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 PRKG1Q13976 671 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 PFKFB3Q16875 520 aaPredicted RBP13.57□□□□□ -0.24
SPARC-207ENST00000537849 BTNL9Q6UXG8 535 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 CHAMP1Q96JM3 812 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 JMJD4Q9H9V9 463 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 VAT1LQ9HCJ6 419 aa13.57□□□□□ -0.24
SPARC-207ENST00000537849 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
SPARC-207ENST00000537849 BMP3P12645 472 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 SCG2P13521 617 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 SLC16A2P36021 539 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 SLC1A4P43007 532 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 MAP1SQ66K74 1059 aaPredicted RBP13.56□□□□□ -0.24
SPARC-207ENST00000537849 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 ADGRF4Q8IZF3 695 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 PIBF1Q8WXW3 757 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 NUP88Q99567 741 aaPredicted RBP13.56□□□□□ -0.24
SPARC-207ENST00000537849 KIAA1683Q9H0B3 1180 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 GOPCQ9HD26 462 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 NMRK2Q9NPI5 230 aa13.56□□□□□ -0.24
SPARC-207ENST00000537849 PLA2G6O60733 806 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 FMR1Q06787 632 aaKnown RBP eCLIP13.55□□□□□ -0.24
SPARC-207ENST00000537849 SPP2Q13103 211 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 CCDC96Q2M329 555 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 LDHDQ86WU2 507 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 PIGSQ96S52 555 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
SPARC-207ENST00000537849 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 PICK1Q9NRD5 415 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 VPS54Q9P1Q0 977 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 SNCAIPQ9Y6H5 919 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 ZHX2Q9Y6X8 837 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 SMCHD1A6NHR9 2005 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 PAPPA2Q9BXP8 1791 aa13.55□□□□□ -0.24
SPARC-207ENST00000537849 KIF28PB7ZC32 967 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 USP17L10C9JJH3 530 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 TRAF5O00463 557 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 RAD21O60216 631 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 MMP1P03956 469 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 MCM4P33991 863 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 NF2P35240 595 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 IREB2P48200 963 aaKnown RBP13.54□□□□□ -0.24
SPARC-207ENST00000537849 BACE1P56817 501 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 KIF23Q02241 960 aaPredicted RBP13.54□□□□□ -0.24
SPARC-207ENST00000537849 NPY5RQ15761 445 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 FAM173BQ6P4H8 233 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 MOB2Q70IA6 237 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 SPICE1Q8N0Z3 855 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 ZNF280CQ8ND82 737 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 RRP36Q96EU6 259 aaKnown RBP13.54□□□□□ -0.24
SPARC-207ENST00000537849 PHF20Q9BVI0 1012 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 SH3GLB2Q9NR46 395 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 EMILIN3Q9NT22 766 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 AFG3L2Q9Y4W6 797 aa13.54□□□□□ -0.24
SPARC-207ENST00000537849 OTOFQ9HC10 1997 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 PNMA6FA0A0J9YX94 578 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPARC-207ENST00000537849 TRIM29Q14134 588 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 VGLL4Q14135 290 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 ZYXQ15942 572 aaKnown RBP13.53□□□□□ -0.24
SPARC-207ENST00000537849 FOXD4L6Q3SYB3 417 aaPredicted RBP13.53□□□□□ -0.24
SPARC-207ENST00000537849 FAM83BQ5T0W9 1011 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 LDLRAD1Q5T700 205 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 WWC2Q6AWC2 1192 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 MCTP1Q6DN14 999 aa13.53□□□□□ -0.24
SPARC-207ENST00000537849 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms