RNA–Protein interactions for RNA: ENST00000537694.1

PPP1CA-209, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 882 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-209ENST00000537694 ATP5JP18859 108 aa18.37■□□□□ 0.53
PPP1CA-209ENST00000537694 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
PPP1CA-209ENST00000537694 ABRAQ8N0Z2 381 aa18.37■□□□□ 0.53
PPP1CA-209ENST00000537694 SLC4A4Q9Y6R1 1079 aa18.37■□□□□ 0.53
PPP1CA-209ENST00000537694 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
PPP1CA-209ENST00000537694 SLC25A27O95847 323 aa18.36■□□□□ 0.53
PPP1CA-209ENST00000537694 CHGBP05060 677 aa18.36■□□□□ 0.53
PPP1CA-209ENST00000537694 TMEM132BQ14DG7 1078 aa18.36■□□□□ 0.53
PPP1CA-209ENST00000537694 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
PPP1CA-209ENST00000537694 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
PPP1CA-209ENST00000537694 FBXO28Q9NVF7 368 aa18.36■□□□□ 0.53
PPP1CA-209ENST00000537694 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
PPP1CA-209ENST00000537694 LRRC41Q15345 812 aa18.35■□□□□ 0.53
PPP1CA-209ENST00000537694 FAM109BQ6ICB4 259 aaPredicted RBP18.35■□□□□ 0.53
PPP1CA-209ENST00000537694 MMP19Q99542 508 aa18.35■□□□□ 0.53
PPP1CA-209ENST00000537694 HAUS7Q99871 368 aa18.35■□□□□ 0.53
PPP1CA-209ENST00000537694 PGK2P07205 417 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 STAT3P40763 770 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 KCTD2Q14681 263 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 SHHQ15465 462 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 TRIM60Q495X7 471 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 C16orf86Q6ZW13 317 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 BADQ92934 168 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 GOPCQ9HD26 462 aa18.34■□□□□ 0.53
PPP1CA-209ENST00000537694 RARBP10826 455 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 UBE3CQ15386 1083 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 FAM47AQ5JRC9 791 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 ZSCAN25Q6NSZ9 544 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 CTR9Q6PD62 1173 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 GPATCH3Q96I76 525 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 ADAMTS5Q9UNA0 930 aa18.33■□□□□ 0.52
PPP1CA-209ENST00000537694 VWA5AO00534 786 aa18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 TLE2Q04725 743 aa18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 SH3RF1Q7Z6J0 888 aa18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 RIOX2Q8IUF8 465 aa18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 XPNPEP3Q9NQH7 507 aa18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 ZBTB47Q9UFB7 747 aaPredicted RBP18.32■□□□□ 0.52
PPP1CA-209ENST00000537694 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 PGK1P00558 417 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 SLC4A3P48751 1232 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 C9orf50Q5SZB4 431 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 ZNF697Q5TEC3 545 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 RNF180Q86T96 592 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 GUCD1Q96NT3 240 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 MKNK2Q9HBH9 465 aa18.31■□□□□ 0.52
PPP1CA-209ENST00000537694 TRIM43BA6NCK2 446 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 TAL1P17542 331 aaPredicted RBP18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 SNX17Q15036 470 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 ZNF792Q3KQV3 632 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 TRIM43Q96BQ3 446 aaPredicted RBP18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 NRBP1Q9UHY1 535 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 DIS3Q9Y2L1 958 aaKnown RBP18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 TACC3Q9Y6A5 838 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 NAV1Q8NEY1 1877 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
PPP1CA-209ENST00000537694 MINDY4BA8MYZ0 360 aa18.29■□□□□ 0.52
PPP1CA-209ENST00000537694 DDX11Q96FC9 970 aa18.29■□□□□ 0.52
PPP1CA-209ENST00000537694 NUP88Q99567 741 aaPredicted RBP18.29■□□□□ 0.52
PPP1CA-209ENST00000537694 PDLIM7Q9NR12 457 aa18.29■□□□□ 0.52
PPP1CA-209ENST00000537694 PHF24Q9UPV7 400 aa18.29■□□□□ 0.52
PPP1CA-209ENST00000537694 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
PPP1CA-209ENST00000537694 RLFQ13129 1914 aa18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 C1orf53Q5VUE5 145 aa18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 STRBPQ96SI9 672 aaKnown RBP18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 CDX2Q99626 313 aaPredicted RBP18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 SEMA6BQ9H3T3 888 aa18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 ECHDC1Q9NTX5 307 aa18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 ZNF214Q9UL59 606 aaPredicted RBP18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 CTDP1Q9Y5B0 961 aaPredicted RBP18.28■□□□□ 0.52
PPP1CA-209ENST00000537694 F5H6K3 240 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 COPB2P35606 906 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 KLRC3Q07444 240 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 CPXCR1Q8N123 301 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 CRBNQ96SW2 442 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 SLF1Q9BQI6 1058 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 ARPP21Q9UBL0 812 aaPredicted RBP18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 CLIP2Q9UDT6 1046 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 PCDHB15Q9Y5E8 787 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 FRMPD3Q5JV73 1810 aa18.27■□□□□ 0.52
PPP1CA-209ENST00000537694 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.51
PPP1CA-209ENST00000537694 BAZ2AQ9UIF9 1905 aaKnown RBP18.27■□□□□ 0.51
PPP1CA-209ENST00000537694 UNC80Q8N2C7 3258 aa18.27■□□□□ 0.51
PPP1CA-209ENST00000537694 PQBP1O60828 265 aaKnown RBP18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 CLTBP09497 229 aa18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 ZNF865P0CJ78 1059 aaPredicted RBP18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 AKR1A1P14550 325 aa18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 RAG1P15918 1043 aa18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 SNRNP48Q6IEG0 339 aaKnown RBP18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 PRPF38AQ8NAV1 312 aaKnown RBP18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 REPS2Q8NFH8 660 aa18.26■□□□□ 0.51
PPP1CA-209ENST00000537694 TEX13BQ9BXU2 312 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms