RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 NSUN7Q8NE18 718 aaKnown RBP11.22□□□□□ -0.61
GGA3-201ENST00000537686 PI4K2BQ8TCG2 481 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 IFT74Q96LB3 600 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 PSTPIP2Q9H939 334 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 SRP68Q9UHB9 627 aaKnown RBP11.22□□□□□ -0.61
GGA3-201ENST00000537686 IVNS1ABPQ9Y6Y0 642 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 MED23Q9ULK4 1368 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 TLDC2A0PJX2 215 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 H7C1W4 665 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 ICA1Q05084 483 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 PDIA6Q15084 440 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 GSTA5Q7RTV2 222 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 CCDC84Q86UT8 332 aaPredicted RBP11.22□□□□□ -0.61
GGA3-201ENST00000537686 CALCOCO1Q9P1Z2 691 aa11.22□□□□□ -0.61
GGA3-201ENST00000537686 TCP10L2B9ZVM9 353 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 H7C1D1 291 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 M0R2C6 588 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 NOP56O00567 594 aaKnown RBP11.21□□□□□ -0.61
GGA3-201ENST00000537686 GCNT3O95395 438 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 TECP42680 631 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 CYP26C1Q6V0L0 522 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 TMTC1Q8IUR5 882 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.61
GGA3-201ENST00000537686 NLRC4Q9NPP4 1024 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 FAM207AQ9NSI2 230 aaPredicted RBP11.21□□□□□ -0.61
GGA3-201ENST00000537686 JCADQ9P266 1359 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 PIK3C2AO00443 1686 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 AFF2P51816 1311 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 GAS7O60861 476 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 KRT5P13647 590 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 TNFAIP3P21580 790 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 NDUFA8P51970 172 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 RNASE9P60153 205 aaKnown RBP11.21□□□□□ -0.61
GGA3-201ENST00000537686 VWA3BQ502W6 1294 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 SUSD4Q5VX71 490 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 SPECC1LQ69YQ0 1117 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 NEK8Q86SG6 692 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 TPH2Q8IWU9 490 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 MARCH10Q8NA82 808 aaPredicted RBP11.21□□□□□ -0.61
GGA3-201ENST00000537686 ATRIPQ8WXE1 791 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 CARD6Q9BX69 1037 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 IMPACTQ9P2X3 320 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 CLIC4Q9Y696 253 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 PALLDQ8WX93 1383 aa11.21□□□□□ -0.61
GGA3-201ENST00000537686 DKC1O60832 514 aaKnown RBP eCLIP11.21□□□□□ -0.62
GGA3-201ENST00000537686 HSPA1LP34931 641 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 TNFAIP1Q13829 316 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 RASGRF1Q13972 1273 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 WDR44Q5JSH3 913 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 MICALCLQ6ZW33 695 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 FMNL3Q8IVF7 1028 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 SYNE4Q8N205 404 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 TTC16Q8NEE8 873 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 SLF1Q9BQI6 1058 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 CCDC77Q9BR77 488 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 NT5C3AQ9H0P0 336 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 MRPL44Q9H9J2 332 aaKnown RBP11.21□□□□□ -0.62
GGA3-201ENST00000537686 PCDHA5Q9Y5H7 936 aa11.21□□□□□ -0.62
GGA3-201ENST00000537686 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 A0A1W2PRG0 241 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 SEMA3EO15041 775 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 SPOPO43791 374 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 PCP11498 1178 aaKnown RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 TNNC1P63316 161 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 TUBB4BP68371 445 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 TUBBP07437 444 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 OR52Z1P0C646 297 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 ALAS1P13196 640 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 PRR16Q569H4 304 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 SLFN13Q68D06 897 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 RDH13Q8NBN7 331 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 NAPGQ99747 312 aaPredicted RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 COMMD10Q9Y6G5 202 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 OVOS2A0A0G2JMS6 1433 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 KDM6AO15550 1401 aaPredicted RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 RIOK3O14730 519 aaKnown RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 LARGE1O95461 756 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 TERF1P54274 439 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 DIXDC1Q155Q3 683 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 DNAJC21Q5F1R6 531 aaKnown RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 KRBA2Q6ZNG9 492 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 ERO1AQ96HE7 468 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
GGA3-201ENST00000537686 PSMB7Q99436 277 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 NUP58Q9BVL2 599 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 PCDHA1Q9Y5I3 950 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 NALCNQ8IZF0 1738 aa11.2□□□□□ -0.62
GGA3-201ENST00000537686 ATP2A1O14983 1001 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms