RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CNOT10Q9H9A5 744 aaKnown RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 USH1CQ9Y6N9 552 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 WDR19Q8NEZ3 1342 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 TRIM75PA6NK02 468 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PPP1R12BO60237 982 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 ATP5JP18859 108 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 TNFRSF8P28908 595 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 VSIG1Q86XK7 387 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 LRRC45Q96CN5 670 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 FAM237AA0A1B0GTK4 181 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 ECM2O94769 699 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PPP1R2P41236 205 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 NDUFA8P51970 172 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 AMPD3Q01432 767 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 ZBTB16Q05516 673 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 RPUSD2Q8IZ73 545 aaKnown RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 RNF10Q8N5U6 811 aaKnown RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 MGARPQ8TDB4 240 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 KIFC2Q96AC6 838 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 TCP11L1Q9NUJ3 509 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 SERTAD1Q9UHV2 236 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 CCDC189A1A4V9 331 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 ATP5J2-PTCD1G3V325 749 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PTCD1O75127 700 aaKnown RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 ZFYP08048 801 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 BIRC3Q13489 604 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 MTMR3Q13615 1198 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 MFN1Q8IWA4 741 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 CALML4Q96GE6 196 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 ZNF335Q9H4Z2 1342 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 A0A087WZG4 1122 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 PSMD14O00487 310 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 GHRP10912 638 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CABP4P57796 275 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 SESN3P58005 492 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ADCK5Q3MIX3 580 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CATIPQ7Z7H3 387 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 PI4K2BQ8TCG2 481 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 WHAMMQ8TF30 809 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 NOC4LQ9BVI4 516 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 YIPF3Q9GZM5 350 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CABP5Q9NP86 173 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 SOWAHDA6NJG2 315 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 FAM107AO95990 144 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 FERP16591 822 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ZNF131P52739 623 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 C2orf54Q08AI8 447 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TMED1Q13445 227 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 POSTNQ15063 836 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 RTN1Q16799 776 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 KRT71Q3SY84 523 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 GKAP1Q5VSY0 366 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 MFSD6Q6ZSS7 791 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 RNF168Q8IYW5 571 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 RETREG2Q8NC44 543 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 SMC6Q96SB8 1091 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 HPCAL4Q9UM19 191 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TMEM94Q12767 1356 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 EIF4E1BA6NMX2 242 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 RNF113AO15541 343 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TCP1P17987 556 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TFCP2Q12800 502 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TMEM266Q2M3C6 531 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 USPL1Q5W0Q7 1092 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 NCAPH2Q6IBW4 605 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TOGARAM2Q6ZUX3 1019 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 PARP9Q8IXQ6 854 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CCDC26Q8TAB7 109 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 SH3GL2Q99962 352 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 EPN3Q9H201 632 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 POLR2DO15514 142 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 KDM7AQ6ZMT4 941 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ACRBPQ8NEB7 543 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ARHGEF2Q92974 986 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 NOX5Q96PH1 765 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 NAP1L3Q99457 506 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CDC5LQ99459 802 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CCDC77Q9BR77 488 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 BLZF1Q9H2G9 400 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ANKZF1Q9H8Y5 726 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 NKIRAS1Q9NYS0 192 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ABCF2Q9UG63 623 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ADGRG1Q9Y653 693 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 NDUFB9Q9Y6M9 179 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ABCC3O15438 1527 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ARHGEF28Q8N1W1 1705 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ANKARQ7Z5J8 1434 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ANKRD33BA6NCL7 494 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 COBLO75128 1261 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CIB2O75838 187 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 SNUPNO95149 360 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 WTAPQ15007 396 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ZNF174Q15697 407 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CWF19L2Q2TBE0 894 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 BEND3Q5T5X7 828 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 UNC5CLQ8IV45 518 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 ANKRD42Q8N9B4 389 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 PAG1Q9NWQ8 432 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 IRAK4Q9NWZ3 460 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 NOP53Q9NZM5 478 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms