RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 AMIGO3Q86WK7 504 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 SH2B1Q9NRF2 756 aaPredicted RBP9.34□□□□□ -0.91
CCDC60-203ENST00000536742 DOT1LQ8TEK3 1739 aa9.34□□□□□ -0.92
CCDC60-203ENST00000536742 TOGARAM1Q9Y4F4 1720 aa9.34□□□□□ -0.92
CCDC60-203ENST00000536742 ESRRAP11474 423 aaPredicted RBP9.33□□□□□ -0.92
CCDC60-203ENST00000536742 TMF1P82094 1093 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 RSPO4Q2I0M5 234 aaPredicted RBP9.33□□□□□ -0.92
CCDC60-203ENST00000536742 RGL3Q3MIN7 710 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 FBXO11Q86XK2 927 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 RNF19AQ9NV58 838 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 CCDC88AQ3V6T2 1871 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
CCDC60-203ENST00000536742 RLBP1P12271 317 aa9.32□□□□□ -0.92
CCDC60-203ENST00000536742 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
CCDC60-203ENST00000536742 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
CCDC60-203ENST00000536742 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
CCDC60-203ENST00000536742 AKAP2Q9Y2D5 859 aa9.32□□□□□ -0.92
CCDC60-203ENST00000536742 SCN4AP35499 1836 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 E9PSI1 815 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 FSCN2O14926 492 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 RBM25P49756 843 aaKnown RBP9.31□□□□□ -0.92
CCDC60-203ENST00000536742 C19orf57Q0VDD7 668 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 NKAPLQ5M9Q1 402 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 ADAMTSL4Q6UY14 1074 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 SV2BQ7L1I2 683 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 NOC4LQ9BVI4 516 aaKnown RBP9.31□□□□□ -0.92
CCDC60-203ENST00000536742 TAF1DQ9H5J8 278 aaPredicted RBP9.31□□□□□ -0.92
CCDC60-203ENST00000536742 METTL5Q9NRN9 209 aaKnown RBP9.31□□□□□ -0.92
CCDC60-203ENST00000536742 TMEM39AQ9NV64 488 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 SAMM50Q9Y512 469 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 C4AP0C0L4 1744 aa9.31□□□□□ -0.92
CCDC60-203ENST00000536742 UNCXA6NJT0 531 aa9.3□□□□□ -0.92
CCDC60-203ENST00000536742 LINC01387J3KSC0 135 aa9.3□□□□□ -0.92
CCDC60-203ENST00000536742 AOC2O75106 756 aa9.3□□□□□ -0.92
CCDC60-203ENST00000536742 CTSHP09668 335 aa9.3□□□□□ -0.92
CCDC60-203ENST00000536742 HNRNPUQ00839 825 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC60-203ENST00000536742 SETDB1Q15047 1291 aa9.3□□□□□ -0.92
CCDC60-203ENST00000536742 TTF2Q9UNY4 1162 aaKnown RBP9.3□□□□□ -0.92
CCDC60-203ENST00000536742 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
CCDC60-203ENST00000536742 PALLDQ8WX93 1383 aa9.29□□□□□ -0.92
CCDC60-203ENST00000536742 SOX1O00570 391 aaPredicted RBP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 DYRK3O43781 588 aa9.29□□□□□ -0.92
CCDC60-203ENST00000536742 DDNO94850 711 aaPredicted RBP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 AP3B2Q13367 1082 aa9.29□□□□□ -0.92
CCDC60-203ENST00000536742 PKN2Q16513 984 aaKnown RBP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 ZNF423Q2M1K9 1284 aa9.29□□□□□ -0.92
CCDC60-203ENST00000536742 HP1BP3Q5SSJ5 553 aaPredicted RBP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 IGF2-ASQ6U949 168 aa9.29□□□□□ -0.92
CCDC60-203ENST00000536742 CTU1Q7Z7A3 348 aaKnown RBP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 PNMA8AQ86V59 439 aaPredicted RBP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 DDX21Q9NR30 783 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 KIAA1522Q9P206 1035 aaPredicted RBP9.29□□□□□ -0.92
CCDC60-203ENST00000536742 COL6A3P12111 3177 aa9.29□□□□□ -0.92
CCDC60-203ENST00000536742 SCARA3Q6AZY7 606 aa9.28□□□□□ -0.92
CCDC60-203ENST00000536742 SMARCC1Q92922 1105 aaPredicted RBP9.28□□□□□ -0.92
CCDC60-203ENST00000536742 NECAB3Q96P71 396 aaPredicted RBP9.28□□□□□ -0.92
CCDC60-203ENST00000536742 CDK19Q9BWU1 502 aa9.28□□□□□ -0.92
CCDC60-203ENST00000536742 DICER1Q9UPY3 1922 aaKnown RBP9.27□□□□□ -0.93
CCDC60-203ENST00000536742 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
CCDC60-203ENST00000536742 RECKO95980 971 aa9.27□□□□□ -0.93
CCDC60-203ENST00000536742 CYP11A1P05108 521 aa9.27□□□□□ -0.93
CCDC60-203ENST00000536742 CHRNA5P30532 468 aa9.27□□□□□ -0.93
CCDC60-203ENST00000536742 ZMYM1Q5SVZ6 1142 aa9.27□□□□□ -0.93
CCDC60-203ENST00000536742 Q8N3U1 123 aa9.27□□□□□ -0.93
CCDC60-203ENST00000536742 TP53INP1Q96A56 240 aa9.27□□□□□ -0.93
CCDC60-203ENST00000536742 BACH2Q9BYV9 841 aa9.27□□□□□ -0.93
CCDC60-203ENST00000536742 GPN3Q9UHW5 284 aaPredicted RBP9.27□□□□□ -0.93
CCDC60-203ENST00000536742 DEAF1O75398 565 aaPredicted RBP9.26□□□□□ -0.93
CCDC60-203ENST00000536742 H2AFB1P0C5Y9 115 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 H2AFB2P0C5Z0 115 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 CD68P34810 354 aaPredicted RBP9.26□□□□□ -0.93
CCDC60-203ENST00000536742 FAAP100Q0VG06 881 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 TSNAXIP1Q2TAA8 658 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 AKAP4Q5JQC9 854 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 MAP1SQ66K74 1059 aaPredicted RBP9.26□□□□□ -0.93
CCDC60-203ENST00000536742 CIAPIN1Q6FI81 312 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 TMEM87AQ8NBN3 555 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 WFDC12Q8WWY7 111 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 HHIPL1Q96JK4 782 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 EMILIN2Q9BXX0 1053 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 SAGE1Q9NXZ1 904 aa9.26□□□□□ -0.93
CCDC60-203ENST00000536742 ITGB7P26010 798 aa9.25□□□□□ -0.93
CCDC60-203ENST00000536742 IREB2P48200 963 aaKnown RBP9.25□□□□□ -0.93
CCDC60-203ENST00000536742 PWP1Q13610 501 aa9.25□□□□□ -0.93
CCDC60-203ENST00000536742 CCDC85BQ15834 202 aaPredicted RBP9.25□□□□□ -0.93
CCDC60-203ENST00000536742 XP32Q5T750 250 aa9.25□□□□□ -0.93
CCDC60-203ENST00000536742 SLC7A3Q8WY07 619 aa9.25□□□□□ -0.93
CCDC60-203ENST00000536742 ADAMTSL1Q8N6G6 1762 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 TM4SF5O14894 197 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 NME2P22392 152 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 PLA2G5P39877 138 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 RPS26P62854 115 aaKnown RBP9.24□□□□□ -0.93
CCDC60-203ENST00000536742 GSTM4Q03013 218 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 MEI1Q5TIA1 1274 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 TXNDC11Q6PKC3 985 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
CCDC60-203ENST00000536742 MRPL18Q9H0U6 180 aaKnown RBP9.24□□□□□ -0.93
CCDC60-203ENST00000536742 HACL1Q9UJ83 578 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms